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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_04235 and HEPCGN_04240 are separated by 12 nucleotides
HEPCGN_04240 and HEPCGN_04245 are separated by 26 nucleotides
HEPCGN_04245 and HEPCGN_04250 are separated by 554 nucleotides
HEPCGN_04250 and HEPCGN_04255 overlap by 1 nucleotides
HEPCGN_04235: HEPCGN_04235 - phage tail tape measure protein, at 741,555 to 744,362
_04235
HEPCGN_04240: HEPCGN_04240 - oxidoreductase, at 744,375 to 744,863
_04240
HEPCGN_04245: HEPCGN_04245 - DNA-invertase, at 744,890 to 745,489
_04245
HEPCGN_04250: HEPCGN_04250 - phage tail protein, at 746,044 to 746,655
_04250
HEPCGN_04255: HEPCGN_04255 - phage tail protein, at 746,655 to 748,250
_04255
Group
Condition
HEPCGN
_04235
HEPCGN
_04240
HEPCGN
_04245
HEPCGN
_04250
HEPCGN
_04255
phage
K20
-0.3
+0.1
-0.1
-0.2
-0.2
phage
Bas51
-0.1
-0.2
-0.2
-0.1
-0.1
phage
TP7
-0.2
-0.2
+0.2
-0.1
-0.3
phage
Bas48
-0.0
-0.2
-0.0
-0.1
-0.3
phage
Bas48
-0.2
+0.2
-0.3
-0.1
-0.1
phage
Bas39
+0.0
+0.1
-0.5
-0.0
-0.1
carbon source
Casamino-acids
-0.1
-0.0
-0.1
-0.1
-0.0
phage
Bas39
-0.2
-0.0
+0.1
-0.0
-0.1
carbon source
L-Arabinose
-0.1
-0.0
+0.0
+0.1
-0.3
phage
Bas19
+0.1
-0.1
+0.1
-0.3
-0.1
no phage control
Control_ECOR38
+0.0
+0.2
-0.1
-0.0
-0.3
phage
Bas55
+0.0
+0.1
+0.0
-0.2
-0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.3
-0.1
+0.0
phage
RB68
+0.1
+0.0
-0.1
-0.1
-0.1
phage
Bas55
-0.1
+0.1
+0.2
-0.2
-0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.3
-0.2
-0.2
-0.1
carbon source
Casamino-acids
-0.2
-0.1
+0.1
-0.0
+0.2
carbon source
D-Glucose
-0.1
+0.0
-0.1
+0.2
-0.1
no phage control
Control_ECOR38
+0.0
+0.0
-0.1
-0.0
+0.1
phage
Bas38
-0.0
+0.1
-0.0
-0.0
-0.0
phage
Phi92
+0.2
-0.2
+0.1
-0.1
+0.0
phage
Bas38
+0.0
+0.2
+0.1
-0.1
-0.1
carbon source
L-Arabinose
-0.1
+0.1
+0.3
-0.3
+0.2
phage
Bas19
+0.1
+0.1
+0.0
-0.2
+0.1
phage
K20
+0.1
+0.1
+0.1
-0.2
+0.1
phage
Phi92
+0.1
+0.3
-0.3
+0.1
+0.1
phage
RB23
-0.1
+0.1
+0.2
-0.1
+0.2
phage
TP7
+0.0
+0.2
-0.0
+0.1
+0.1
phage
RB23
+0.0
-0.1
+0.3
+0.0
+0.2
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