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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ycdB and amn are separated by 342 nucleotides
amn and shiA are separated by 101 nucleotides
shiA and rfaF are separated by 314 nucleotides
rfaF and HEPCGN_03530 are separated by 127 nucleotides
HEPCGN_03510: ycdB - putative transcriptional regulatory protein YcdB, at 605,651 to 606,367
ycdB
HEPCGN_03515: amn - AMP nucleosidase, at 606,710 to 608,164
amn
HEPCGN_03520: shiA - shikimate transporter, at 608,266 to 609,582
shiA
HEPCGN_03525: rfaF - Glycosyltransferase family 9 (heptosyltransferase), at 609,897 to 610,949
rfaF
HEPCGN_03530: HEPCGN_03530 - Adhesin, at 611,077 to 611,553
_03530
Group
Condition
HEPCGN
_03510
HEPCGN
_03515
HEPCGN
_03520
HEPCGN
_03525
HEPCGN
_03530
ycdB
amn
shiA
rfaF
phage
TP7
-2.2
+0.0
-0.0
+0.1
-0.3
phage
Bas19
-0.8
-0.2
+0.1
-0.5
-0.3
phage
Bas55
-0.9
+0.0
-0.3
-0.4
+0.1
phage
K20
-0.2
-0.1
-0.1
-0.5
-0.6
phage
Bas48
-0.6
-0.2
-0.0
-0.2
-0.1
phage
RB23
-0.2
-0.1
-0.0
-0.5
-0.2
phage
Bas19
+0.1
-0.1
-0.2
-0.7
-0.2
phage
Bas48
-0.3
+0.0
-0.5
-0.2
-0.0
phage
Bas38
-0.4
-0.1
-0.1
-0.1
+0.1
phage
Bas51
-0.4
+0.2
+0.0
-0.3
-0.1
no phage control
Control_ECOR38
-0.3
-0.1
-0.1
-0.2
+0.2
phage
Bas38
-0.5
+0.0
-0.1
-0.1
+0.2
no phage control
Control_ECOR38
-0.6
+0.0
-0.1
+0.1
+0.1
phage
Bas39
-0.4
-0.1
-0.0
-0.1
+0.2
phage
RB68
-0.5
+0.1
+0.0
+0.0
+0.2
phage
K20
+0.2
+0.1
-0.0
-0.4
+0.0
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.2
+0.1
-0.2
carbon source
Casamino-acids
+0.2
+0.3
-0.2
-0.5
+0.1
phage
Bas39
-0.0
+0.0
-0.2
+0.1
+0.2
phage
Phi92
+0.5
+0.3
+0.2
-0.9
+0.0
phage
Phi92
+0.2
+0.5
-0.1
-0.7
+0.4
carbon source
Sodium-DL-Lactate
-0.2
+0.2
+0.1
+0.4
-0.1
carbon source
L-Arabinose
-0.4
+0.2
+0.0
+0.0
+0.5
phage
RB23
+0.4
+0.0
-0.1
-0.2
+0.2
carbon source
L-Arabinose
-0.2
+0.3
-0.2
+0.0
+0.5
carbon source
Casamino-acids
+0.2
+0.1
+0.0
+0.1
+0.0
phage
Bas55
+0.3
-0.0
-0.0
+0.1
+0.0
phage
TP7
+0.0
+0.4
-0.1
+0.2
+0.0
carbon source
D-Glucose
+0.8
+0.1
-0.0
-0.3
+0.2
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