Fitness for 5 genes in Escherichia coli ECOR38

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500 ntycdB and amn are separated by 342 nucleotidesamn and shiA are separated by 101 nucleotidesshiA and rfaF are separated by 314 nucleotidesrfaF and HEPCGN_03530 are separated by 127 nucleotides HEPCGN_03510: ycdB - putative transcriptional regulatory protein YcdB, at 605,651 to 606,367 ycdB HEPCGN_03515: amn - AMP nucleosidase, at 606,710 to 608,164 amn HEPCGN_03520: shiA - shikimate transporter, at 608,266 to 609,582 shiA HEPCGN_03525: rfaF - Glycosyltransferase family 9 (heptosyltransferase), at 609,897 to 610,949 rfaF HEPCGN_03530: HEPCGN_03530 - Adhesin, at 611,077 to 611,553 _03530
Group Condition HEPCGN_03510 HEPCGN_03515 HEPCGN_03520 HEPCGN_03525 HEPCGN_03530
ycdB amn shiA rfaF
phage TP7 -2.2 +0.0 -0.0 +0.1 -0.3
phage Bas19 -0.8 -0.2 +0.1 -0.5 -0.3
phage Bas55 -0.9 +0.0 -0.3 -0.4 +0.1
phage K20 -0.2 -0.1 -0.1 -0.5 -0.6
phage Bas48 -0.6 -0.2 -0.0 -0.2 -0.1
phage RB23 -0.2 -0.1 -0.0 -0.5 -0.2
phage Bas19 +0.1 -0.1 -0.2 -0.7 -0.2
phage Bas48 -0.3 +0.0 -0.5 -0.2 -0.0
phage Bas38 -0.4 -0.1 -0.1 -0.1 +0.1
phage Bas51 -0.4 +0.2 +0.0 -0.3 -0.1
no phage control Control_ECOR38 -0.3 -0.1 -0.1 -0.2 +0.2
phage Bas38 -0.5 +0.0 -0.1 -0.1 +0.2
no phage control Control_ECOR38 -0.6 +0.0 -0.1 +0.1 +0.1
phage Bas39 -0.4 -0.1 -0.0 -0.1 +0.2
phage RB68 -0.5 +0.1 +0.0 +0.0 +0.2
phage K20 +0.2 +0.1 -0.0 -0.4 +0.0
carbon source Sodium-DL-Lactate +0.1 +0.1 -0.2 +0.1 -0.2
carbon source Casamino-acids +0.2 +0.3 -0.2 -0.5 +0.1
phage Bas39 -0.0 +0.0 -0.2 +0.1 +0.2
phage Phi92 +0.5 +0.3 +0.2 -0.9 +0.0
phage Phi92 +0.2 +0.5 -0.1 -0.7 +0.4
carbon source Sodium-DL-Lactate -0.2 +0.2 +0.1 +0.4 -0.1
carbon source L-Arabinose -0.4 +0.2 +0.0 +0.0 +0.5
phage RB23 +0.4 +0.0 -0.1 -0.2 +0.2
carbon source L-Arabinose -0.2 +0.3 -0.2 +0.0 +0.5
carbon source Casamino-acids +0.2 +0.1 +0.0 +0.1 +0.0
phage Bas55 +0.3 -0.0 -0.0 +0.1 +0.0
phage TP7 +0.0 +0.4 -0.1 +0.2 +0.0
carbon source D-Glucose +0.8 +0.1 -0.0 -0.3 +0.2
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