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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
tra5 and ltrA are separated by 191 nucleotides
ltrA and tnp-IS3 are separated by 1043 nucleotides
tnp-IS3 and HEPCGN_03380 are separated by 89 nucleotides
HEPCGN_03380 and tnp-IS600 are separated by 27 nucleotides
HEPCGN_03360: tra5 - IS3 family transposase, at 577,365 to 577,736
tra5
HEPCGN_03365: ltrA - group II intron reverse transcriptase/maturase, at 577,928 to 579,451
ltrA
HEPCGN_03370: tnp-IS3 - IS3 family transposase, at 580,495 to 580,806
tnp-IS3
HEPCGN_03380: HEPCGN_03380 - Phosphotriesterase-related protein, at 580,896 to 581,693
_03380
HEPCGN_03385: tnp-IS600 - IS3 family IS600 transposase, at 581,721 to 582,539
tnp-IS600
Group
Condition
HEPCGN
_03360
HEPCGN
_03365
HEPCGN
_03370
HEPCGN
_03380
HEPCGN
_03385
tra5
ltrA
tnp-IS3
tnp-IS600
phage
Bas19
N.D.
N.D.
N.D.
-0.4
N.D.
phage
Bas48
N.D.
N.D.
N.D.
-0.3
N.D.
phage
K20
N.D.
N.D.
N.D.
-0.3
N.D.
phage
Phi92
N.D.
N.D.
N.D.
-0.2
N.D.
phage
TP7
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
L-Arabinose
N.D.
N.D.
N.D.
-0.2
N.D.
phage
Bas55
N.D.
N.D.
N.D.
-0.2
N.D.
phage
Bas39
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
D-Glucose
N.D.
N.D.
N.D.
-0.1
N.D.
phage
Bas38
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
-0.1
N.D.
phage
RB23
N.D.
N.D.
N.D.
-0.0
N.D.
phage
Bas55
N.D.
N.D.
N.D.
-0.0
N.D.
no phage control
Control_ECOR38
N.D.
N.D.
N.D.
-0.0
N.D.
no phage control
Control_ECOR38
N.D.
N.D.
N.D.
+0.0
N.D.
phage
Bas51
N.D.
N.D.
N.D.
+0.0
N.D.
phage
Bas19
N.D.
N.D.
N.D.
+0.0
N.D.
phage
TP7
N.D.
N.D.
N.D.
+0.1
N.D.
phage
Bas48
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
L-Arabinose
N.D.
N.D.
N.D.
+0.1
N.D.
phage
Bas39
N.D.
N.D.
N.D.
+0.1
N.D.
phage
RB23
N.D.
N.D.
N.D.
+0.1
N.D.
phage
Bas38
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
+0.1
N.D.
phage
Phi92
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
+0.1
N.D.
phage
RB68
N.D.
N.D.
N.D.
+0.2
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
+0.2
N.D.
phage
K20
N.D.
N.D.
N.D.
+0.2
N.D.
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