Fitness for 5 genes in Escherichia coli ECOR38

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500 ntHEPCGN_02405 and quuD are separated by 17 nucleotidesquuD and ompC are separated by 187 nucleotidesompC and HEPCGN_02420 are separated by 510 nucleotidesHEPCGN_02420 and Ile2_trna are separated by 40 nucleotides HEPCGN_02405: HEPCGN_02405 - DUF968 domain-containing protein, at 392,036 to 393,025 _02405 HEPCGN_02410: quuD - antitermination protein QuuD, at 393,043 to 393,426 quuD HEPCGN_02415: ompC - phosphoporin PhoE, at 393,614 to 394,696 ompC HEPCGN_02420: HEPCGN_02420 - Site-specific DNA-methyltransferase, at 395,207 to 395,485 _02420 HEPCGN_02425: Ile2_trna - tRNA-Ile2(cat), at 395,526 to 395,601 _trna
Group Condition HEPCGN_02405 HEPCGN_02410 HEPCGN_02415 HEPCGN_02420 HEPCGN_02425
quuD ompC Ile2_trna
phage Phi92 -1.1 -0.1 -1.4 +1.3 N.D.
no phage control Control_ECOR38 -0.8 -0.0 -0.2 -0.1 N.D.
phage TP7 -0.2 -0.6 -0.7 +0.5 N.D.
carbon source Casamino-acids -0.6 -0.1 -0.2 +0.0 N.D.
phage Phi92 +0.7 -0.2 -1.4 -0.0 N.D.
phage Bas48 +0.0 -0.5 -0.2 +0.1 N.D.
carbon source L-Arabinose -0.6 +0.3 -0.1 -0.0 N.D.
phage Bas38 +0.0 +0.1 -0.2 -0.2 N.D.
no phage control Control_ECOR38 -0.2 -0.1 -0.2 +0.3 N.D.
carbon source Casamino-acids -0.1 -0.3 -0.1 +0.3 N.D.
phage Bas39 +0.1 -0.1 -0.3 +0.1 N.D.
phage RB23 -0.2 -0.0 +0.0 +0.1 N.D.
phage RB23 -0.2 -0.3 -0.2 +0.7 N.D.
carbon source L-Arabinose +0.0 +0.1 -0.2 -0.0 N.D.
phage Bas19 +0.2 -0.1 +0.1 -0.2 N.D.
phage Bas55 -0.0 +0.0 +0.1 -0.1 N.D.
carbon source Sodium-DL-Lactate +0.1 +0.0 -0.0 -0.0 N.D.
phage TP7 +0.2 +0.2 -0.5 +0.1 N.D.
phage Bas39 +0.2 -0.1 -0.1 +0.1 N.D.
phage Bas51 +0.2 +0.1 -0.2 +0.1 N.D.
phage K20 +0.3 +0.1 +0.1 -0.2 N.D.
phage Bas55 +0.9 -0.3 +0.0 -0.2 N.D.
carbon source Sodium-DL-Lactate +0.4 -0.3 +0.1 +0.2 N.D.
phage Bas48 +0.7 +0.1 +0.1 -0.4 N.D.
carbon source D-Glucose +0.3 +0.1 -0.1 +0.2 N.D.
phage Bas38 +0.4 -0.1 +0.1 +0.1 N.D.
phage Bas19 +0.6 +0.1 +0.1 -0.1 N.D.
phage K20 +0.3 +0.4 -0.0 +0.6 N.D.
phage RB68 +1.2 +0.2 -0.0 +0.2 N.D.
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