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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_02340 and HEPCGN_02345 are separated by 111 nucleotides
HEPCGN_02345 and HEPCGN_02350 overlap by 4 nucleotides
HEPCGN_02350 and HEPCGN_02365 are separated by 406 nucleotides
HEPCGN_02365 and HEPCGN_02370 overlap by 4 nucleotides
HEPCGN_02340: HEPCGN_02340 - LexA family transcriptional repressor, at 385,068 to 385,724
_02340
HEPCGN_02345: HEPCGN_02345 - hypothetical protein, at 385,836 to 386,063
_02345
HEPCGN_02350: HEPCGN_02350 - DNA-binding protein, at 386,060 to 386,767
_02350
HEPCGN_02365: HEPCGN_02365 - Rha family transcriptional regulator, at 387,174 to 387,725
_02365
HEPCGN_02370: HEPCGN_02370 - hypothetical protein, at 387,722 to 387,916
_02370
Group
Condition
HEPCGN
_02340
HEPCGN
_02345
HEPCGN
_02350
HEPCGN
_02365
HEPCGN
_02370
carbon source
Sodium-DL-Lactate
N.D.
-1.0
-0.1
-0.1
-0.3
carbon source
Casamino-acids
N.D.
-0.7
+0.0
-0.1
-0.7
phage
K20
N.D.
-0.9
-0.6
-0.0
+0.2
carbon source
Casamino-acids
N.D.
-0.6
-0.0
-0.3
-0.4
carbon source
D-Glucose
N.D.
-0.8
-0.0
+0.0
-0.4
phage
K20
N.D.
-0.5
-0.2
-0.1
-0.3
phage
Bas55
N.D.
-0.4
-0.2
-0.2
-0.3
carbon source
Sodium-DL-Lactate
N.D.
+0.0
-0.1
-0.3
-0.5
phage
Bas19
N.D.
+0.0
-0.1
-0.2
-0.6
phage
RB68
N.D.
-0.1
-0.6
+0.0
-0.1
carbon source
L-Arabinose
N.D.
-0.5
+0.1
-0.1
-0.2
phage
RB23
N.D.
-0.3
+0.1
-0.1
-0.3
phage
Phi92
N.D.
-0.9
-0.1
+0.3
+0.3
phage
Bas19
N.D.
-0.1
+0.1
-0.3
-0.2
phage
Bas48
N.D.
+0.2
-0.5
-0.2
-0.1
phage
RB23
N.D.
-0.3
+0.1
-0.1
-0.3
phage
Bas48
N.D.
+0.2
-0.9
-0.1
+0.3
phage
TP7
N.D.
-0.0
+0.2
-0.1
-0.5
phage
Bas38
N.D.
+0.0
-0.1
-0.4
+0.0
carbon source
L-Arabinose
N.D.
-0.3
-0.1
+0.1
-0.0
phage
TP7
N.D.
+0.7
-0.2
-0.4
-0.4
no phage control
Control_ECOR38
N.D.
-0.2
-0.0
-0.0
+0.0
phage
Bas39
N.D.
-0.1
+0.1
-0.0
-0.2
phage
Bas39
N.D.
-0.4
+0.1
+0.1
+0.0
no phage control
Control_ECOR38
N.D.
-0.1
+0.0
-0.1
+0.1
phage
Bas38
N.D.
-0.1
-0.1
+0.1
+0.1
phage
Bas55
N.D.
+0.4
-0.2
-0.0
-0.1
phage
Bas51
N.D.
+0.2
+0.1
+0.0
+0.0
phage
Phi92
N.D.
-0.5
-0.2
+0.3
+0.7
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