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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
grxA and HEPCGN_02050 are separated by 159 nucleotides
HEPCGN_02050 and nfsA overlap by 17 nucleotides
nfsA and rimK are separated by 60 nucleotides
rimK and ybjN are separated by 87 nucleotides
HEPCGN_02045: grxA - glutaredoxin 1, at 335,083 to 335,340
grxA
HEPCGN_02050: HEPCGN_02050 - DUF1418 domain-containing protein, at 335,500 to 335,787
_02050
HEPCGN_02055: nfsA - nitroreductase NfsA, at 335,771 to 336,493
nfsA
HEPCGN_02060: rimK - 30S ribosomal protein S6--L-glutamate ligase, at 336,554 to 337,456
rimK
HEPCGN_02065: ybjN - Uncharacterized protein YbjN, at 337,544 to 338,020
ybjN
Group
Condition
HEPCGN
_02045
HEPCGN
_02050
HEPCGN
_02055
HEPCGN
_02060
HEPCGN
_02065
grxA
nfsA
rimK
ybjN
phage
Bas19
-0.4
-0.4
-0.7
-0.0
+0.0
phage
Bas48
-0.2
-0.2
+0.0
-0.2
-0.6
phage
TP7
+0.1
+0.3
-0.2
+0.3
-1.5
phage
Bas55
-0.1
-0.1
-0.3
+0.2
-0.5
carbon source
L-Arabinose
-0.1
-0.1
-0.1
-0.2
-0.4
phage
Bas55
-0.4
-0.1
-0.1
+0.0
-0.1
phage
RB23
-0.2
-0.1
-0.2
-0.0
-0.0
phage
Bas39
-0.1
+0.1
-0.2
+0.0
-0.4
carbon source
Sodium-DL-Lactate
-0.1
-0.1
+0.0
+0.1
-0.4
phage
Bas51
+0.0
-0.3
+0.3
-0.2
-0.2
phage
RB23
+0.2
-0.0
-0.3
+0.0
-0.3
phage
RB68
-0.1
-0.6
-0.2
+0.2
+0.3
phage
TP7
-0.1
+0.1
-0.5
-0.1
+0.2
phage
Bas19
-0.3
-0.1
-0.0
+0.1
-0.0
carbon source
L-Arabinose
-0.3
-0.4
+0.2
+0.0
+0.1
phage
Phi92
+0.0
-0.6
-0.2
+0.0
+0.4
phage
Bas48
-0.1
+0.4
-0.1
+0.2
-0.3
carbon source
Casamino-acids
+0.2
-0.2
-0.1
-0.1
+0.3
carbon source
Sodium-DL-Lactate
+0.2
-0.1
+0.2
-0.2
-0.0
no phage control
Control_ECOR38
+0.4
-0.0
-0.1
+0.2
-0.3
phage
K20
-0.1
+0.4
-0.0
+0.1
-0.1
carbon source
Casamino-acids
+0.2
+0.0
-0.1
-0.1
+0.2
phage
Phi92
-0.1
-0.3
-0.1
+0.1
+0.8
carbon source
D-Glucose
+0.3
+0.5
-0.0
-0.1
-0.3
phage
Bas38
+0.1
+0.4
+0.0
+0.1
-0.1
phage
Bas39
+0.0
+0.3
-0.0
-0.1
+0.1
phage
Bas38
+0.0
+0.2
+0.1
+0.1
+0.0
phage
K20
+0.1
+0.3
-0.0
+0.1
-0.0
no phage control
Control_ECOR38
+0.0
+0.2
+0.2
+0.1
+0.1
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