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Protein
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Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
gsiA and gsiB are separated by 19 nucleotides
gsiB and gsiC are separated by 17 nucleotides
gsiC and gsiD are separated by 2 nucleotides
gsiD and pdeI are separated by 177 nucleotides
HEPCGN_01930: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 311,154 to 313,025
gsiA
HEPCGN_01935: gsiB - glutathione ABC transporter substrate-binding protein GsiB, at 313,045 to 314,583
gsiB
HEPCGN_01940: gsiC - glutathione ABC transporter permease GsiC, at 314,601 to 315,521
gsiC
HEPCGN_01945: gsiD - glutathione ABC transporter permease GsiD, at 315,524 to 316,435
gsiD
HEPCGN_01950: pdeI - putative cyclic di-GMP phosphodiesterase PdeI, at 316,613 to 318,961
pdeI
Group
Condition
HEPCGN
_01930
HEPCGN
_01935
HEPCGN
_01940
HEPCGN
_01945
HEPCGN
_01950
gsiA
gsiB
gsiC
gsiD
pdeI
phage
RB23
-0.3
-0.2
+0.1
-0.5
+0.0
phage
RB68
-0.0
-0.2
-0.1
-0.1
-0.3
carbon source
L-Arabinose
-0.2
-0.2
-0.2
-0.2
+0.0
phage
TP7
+0.2
-0.2
-0.1
-0.7
+0.4
phage
Bas19
+0.0
+0.3
+0.1
-0.7
-0.0
carbon source
D-Glucose
+0.0
+0.1
-0.2
-0.3
+0.1
phage
Bas48
-0.2
-0.0
+0.2
+0.0
-0.1
carbon source
L-Arabinose
+0.3
-0.2
-0.3
+0.2
-0.0
no phage control
Control_ECOR38
+0.1
-0.0
+0.1
-0.3
+0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.2
-0.0
+0.0
-0.1
phage
Bas19
-0.4
-0.1
+0.2
+0.5
-0.1
phage
Bas38
-0.0
+0.1
+0.1
+0.4
-0.1
carbon source
Casamino-acids
+0.2
+0.1
+0.0
+0.2
-0.1
carbon source
Casamino-acids
+0.1
-0.0
-0.1
+0.5
-0.1
phage
K20
+0.1
+0.0
-0.1
+0.2
+0.3
phage
K20
-0.3
+0.1
+0.1
+0.2
+0.3
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.2
+0.3
-0.1
phage
Bas55
-0.0
-0.1
-0.0
+0.6
+0.1
phage
Bas48
+0.2
+0.2
+0.3
-0.4
+0.3
phage
RB23
+0.1
-0.1
+0.2
+0.3
+0.2
phage
Phi92
-0.1
-0.2
+0.5
+0.4
+0.0
phage
Bas38
+0.4
+0.1
-0.0
+0.3
-0.2
no phage control
Control_ECOR38
+0.2
+0.1
+0.1
+0.6
-0.3
phage
Bas39
+0.0
+0.2
+0.1
+0.3
+0.1
phage
Bas39
+0.2
-0.1
+0.1
+0.4
+0.1
phage
Phi92
+0.0
-0.0
+0.1
+0.5
+0.3
phage
Bas55
+0.0
-0.0
+0.1
+0.6
+0.3
phage
TP7
+0.7
-0.0
+0.2
+0.5
-0.4
phage
Bas51
+0.0
+0.1
+0.3
+0.9
+0.1
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