Fitness for 5 genes in Escherichia coli ECOR38

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500 ntmntS and mntR are separated by 185 nucleotidesmntR and ybiR overlap by 4 nucleotidesybiR and ldtB are separated by 58 nucleotidesldtB and ybiT are separated by 218 nucleotides HEPCGN_01860: mntS - manganase accumulation protein MntS, at 296,398 to 296,526 mntS HEPCGN_01865: mntR - manganese-binding transcriptional regulator MntR, at 296,712 to 297,179 mntR HEPCGN_01870: ybiR - Inner membrane protein YbiR, at 297,176 to 298,294 ybiR HEPCGN_01875: ldtB - L,D-transpeptidase, at 298,353 to 299,273 ldtB HEPCGN_01880: ybiT - ABC-F family ATPase, at 299,492 to 301,084 ybiT
Group Condition HEPCGN_01860 HEPCGN_01865 HEPCGN_01870 HEPCGN_01875 HEPCGN_01880
mntS mntR ybiR ldtB ybiT
phage Bas48 +0.2 -0.1 -0.4 -3.8 +0.4
phage Phi92 +0.0 -0.2 -0.2 -3.6 +0.3
phage Phi92 +0.3 -0.0 +0.1 -3.0 +0.4
phage Bas48 -0.3 +0.5 +0.2 -2.5 +0.4
phage TP7 -0.4 +0.6 -0.0 -2.2 +0.5
phage RB23 -0.6 +0.2 -0.3 -0.0 -0.1
phage TP7 +0.3 +0.4 -0.1 -2.0 +0.4
phage Bas55 -0.2 -0.0 -0.3 -0.2 +0.0
phage Bas39 +0.0 +0.1 -0.1 -0.6 +0.0
phage Bas38 +0.2 -0.4 -0.1 -0.4 +0.1
phage Bas51 -0.3 -0.0 +0.0 -0.4 +0.1
phage Bas19 +0.0 -0.0 -0.1 -0.6 +0.3
phage RB68 +0.5 -0.5 -0.3 +0.1 -0.0
no phage control Control_ECOR38 +0.5 -0.1 -0.2 -0.5 +0.0
phage K20 +0.1 +0.1 -0.1 -0.4 +0.2
phage Bas39 +0.5 +0.2 -0.1 -0.7 +0.1
phage Bas38 +0.4 +0.1 -0.1 -0.5 +0.1
phage Bas19 +0.1 +0.0 -0.2 -0.2 +0.3
carbon source Casamino-acids -0.0 +0.2 -0.0 -0.1 -0.0
carbon source Sodium-DL-Lactate +0.1 +0.1 -0.1 +0.3 -0.2
no phage control Control_ECOR38 +0.3 +0.1 +0.1 -0.4 +0.1
phage Bas55 +0.4 +0.3 -0.3 -0.4 +0.3
carbon source Sodium-DL-Lactate +0.6 +0.4 +0.0 -0.4 -0.1
carbon source D-Glucose +0.3 -0.1 +0.1 -0.0 +0.2
carbon source L-Arabinose +1.1 -0.2 -0.1 -0.0 +0.0
phage RB23 +0.3 +0.2 +0.2 -0.3 +0.4
carbon source Casamino-acids +0.4 +0.2 +0.1 +0.1 -0.0
carbon source L-Arabinose +0.5 +0.2 -0.1 +0.1 -0.0
phage K20 +0.5 +0.2 -0.0 +0.3 +0.3
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