Fitness for 5 genes in Escherichia coli ECOR38

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500 ntrlpA and mrdB are separated by 10 nucleotidesmrdB and mrdA are separated by 2 nucleotidesmrdA and rlmH are separated by 30 nucleotidesrlmH and rsfS are separated by 3 nucleotides HEPCGN_00900: rlpA - endolytic peptidoglycan transglycosylase RlpA, at 107,705 to 108,793 rlpA HEPCGN_00905: mrdB - peptidoglycan glycosyltransferase MrdB, at 108,804 to 109,916 mrdB HEPCGN_00910: mrdA - peptidoglycan DD-transpeptidase MrdA, at 109,919 to 111,820 mrdA HEPCGN_00915: rlmH - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 111,851 to 112,318 rlmH HEPCGN_00920: rsfS - ribosome silencing factor, at 112,322 to 112,639 rsfS
Group Condition HEPCGN_00900 HEPCGN_00905 HEPCGN_00910 HEPCGN_00915 HEPCGN_00920
rlpA mrdB mrdA rlmH rsfS
phage TP7 -0.2 N.D. N.D. -2.5 -3.0
phage TP7 -0.2 N.D. N.D. -2.6 -1.4
phage Bas19 -0.0 N.D. N.D. -1.0 -3.1
phage Bas48 +0.0 N.D. N.D. -0.9 -3.0
phage RB23 -0.0 N.D. N.D. -2.1 -1.6
phage Bas51 -0.1 N.D. N.D. -1.0 -1.8
phage Bas19 +0.1 N.D. N.D. -0.9 -1.5
phage Bas38 -0.0 N.D. N.D. -0.9 -1.3
phage Bas39 -0.0 N.D. N.D. +0.2 -1.8
phage Bas48 -0.4 N.D. N.D. -0.5 -0.6
phage RB23 +0.1 N.D. N.D. -0.4 -1.1
carbon source L-Arabinose -0.1 N.D. N.D. +1.0 -2.2
phage Bas55 -0.1 N.D. N.D. -1.2 +0.0
phage K20 +0.1 N.D. N.D. -1.1 -0.3
carbon source Casamino-acids -0.1 N.D. N.D. -0.2 -0.6
phage K20 -0.2 N.D. N.D. -0.7 +0.3
no phage control Control_ECOR38 +0.1 N.D. N.D. -0.4 -0.1
carbon source D-Glucose -0.2 N.D. N.D. +0.5 -0.5
no phage control Control_ECOR38 +0.1 N.D. N.D. +0.5 -0.7
carbon source Casamino-acids -0.3 N.D. N.D. +0.2 +0.1
carbon source L-Arabinose +0.1 N.D. N.D. +0.0 -0.1
phage Bas39 +0.0 N.D. N.D. +0.4 -0.4
phage Bas55 -0.2 N.D. N.D. -0.3 +0.7
phage Bas38 +0.1 N.D. N.D. +0.2 -0.1
carbon source Sodium-DL-Lactate -0.2 N.D. N.D. +1.1 -0.6
phage Phi92 -0.5 N.D. N.D. +1.2 -0.3
carbon source Sodium-DL-Lactate -0.0 N.D. N.D. +1.0 -0.5
phage RB68 -0.1 N.D. N.D. +0.2 +1.2
phage Phi92 +0.1 N.D. N.D. +1.4 +3.2
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