Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF993 and GFF994 overlap by 8 nucleotidesGFF994 and GFF995 overlap by 4 nucleotidesGFF995 and GFF996 are separated by 16 nucleotidesGFF996 and GFF997 are separated by 5 nucleotides GFF993 - Type IV pilus biogenesis protein PilF, at 312,147 to 313,001 GFF993 GFF994 - Cytoskeleton protein RodZ, at 312,994 to 313,959 GFF994 GFF995 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3), at 313,956 to 315,230 GFF995 GFF996 - Histidyl-tRNA synthetase (EC 6.1.1.21), at 315,247 to 316,557 GFF996 GFF997 - UPF0070 protein YfgM, at 316,563 to 317,255 GFF997
Group Condition GFF993 GFF994 GFF995 GFF996 GFF997
complex community Community=arabino-guar; Passage=4 -0.8 +0.5 N.D. N.D. -1.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.1 -0.5 N.D. N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 -0.2 N.D. N.D. -0.6
complex community Community=arabino-guar; Passage=4 -0.5 +0.8 N.D. N.D. -2.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 -0.5 N.D. N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.0 -0.3 N.D. N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 -0.0 N.D. N.D. -0.5
no phage control no phage control -0.1 -0.6 N.D. N.D. -0.6
complex community Community=arabino-guar; Passage=4 -0.5 +0.9 N.D. N.D. -1.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.9 -0.5 N.D. N.D. +0.2
complex community Community=guar; Passage=4 +0.3 +0.0 N.D. N.D. -1.2
complex community Community=Kojac gum; Passage=4 -0.1 +0.7 N.D. N.D. -1.5
complex community Community=Locust bean gum; Passage=1 -0.6 +0.3 N.D. N.D. -0.5
complex community Community=arabino-guar; Passage=4 -0.8 +1.3 N.D. N.D. -1.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.4 N.D. N.D. -0.7
complex community Community=Locust bean gum; Passage=4 +0.4 -0.1 N.D. N.D. -0.9
complex community Community=guar; Passage=4 +0.7 +0.6 N.D. N.D. -1.5
complex community Community=guar; Passage=4 +0.6 +0.6 N.D. N.D. -1.4
complex community Community=guar; Passage=4 +0.7 +0.3 N.D. N.D. -1.0
complex community Community=Locust bean gum; Passage=4 +0.8 +0.6 N.D. N.D. -1.0
phage phage_bap4 +0.9 +0.2 N.D. N.D. -0.6
phage phage_bap4 +1.3 +0.3 N.D. N.D. -0.7
complex community Community=Locust bean gum; Passage=4 +0.9 +1.0 N.D. N.D. -1.0
phage phage_bap4 +1.4 +0.0 N.D. N.D. -0.2
phage phage_bap4 +1.4 +0.2 N.D. N.D. -0.2
complex community Community=Locust bean gum; Passage=4 +0.9 +1.2 N.D. N.D. -0.4
phage phage_bap4 +3.7 -0.4 N.D. N.D. -0.8
phage phage_bap4 +3.8 -0.5 N.D. N.D. -0.3
phage phage_bap4 +3.8 -0.8 N.D. N.D. -0.1
phage phage_bap4 +3.9 -0.1 N.D. N.D. -0.6
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