Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF991 and GFF992 are separated by 21 nucleotidesGFF992 and GFF993 are separated by 4 nucleotidesGFF993 and GFF994 overlap by 8 nucleotidesGFF994 and GFF995 overlap by 4 nucleotides GFF991 - Nucleoside diphosphate kinase (EC 2.7.4.6), at 310,547 to 310,972 GFF991 GFF992 - 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192), at 310,994 to 312,142 GFF992 GFF993 - Type IV pilus biogenesis protein PilF, at 312,147 to 313,001 GFF993 GFF994 - Cytoskeleton protein RodZ, at 312,994 to 313,959 GFF994 GFF995 - (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3), at 313,956 to 315,230 GFF995
Group Condition GFF991 GFF992 GFF993 GFF994 GFF995
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.7 -0.9 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 -1.0 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -1.1 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -1.0 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.6 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -1.0 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.5 -0.8 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.6 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.9 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.4 -0.7 +0.0 N.D.
complex community Community=guar; Passage=4 N.D. -1.2 +0.3 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.4 -0.8 +0.5 N.D.
complex community Community=Kojac gum; Passage=4 N.D. -1.3 -0.1 +0.7 N.D.
complex community Community=guar; Passage=4 N.D. -1.8 +0.7 +0.6 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.9 -0.5 +0.8 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.8 -0.5 +0.9 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.6 -0.8 +1.3 N.D.
complex community Community=guar; Passage=4 N.D. -1.1 +0.7 +0.3 N.D.
complex community Community=guar; Passage=4 N.D. -1.1 +0.6 +0.6 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 +0.8 +0.6 N.D.
phage phage_bap4 N.D. -0.1 +0.9 +0.2 N.D.
phage phage_bap4 N.D. -0.2 +1.4 +0.0 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 +0.9 +1.0 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.6 +0.9 +1.2 N.D.
phage phage_bap4 N.D. +0.0 +1.3 +0.3 N.D.
phage phage_bap4 N.D. +0.1 +1.4 +0.2 N.D.
phage phage_bap4 N.D. +0.2 +3.8 -0.8 N.D.
phage phage_bap4 N.D. +0.3 +3.8 -0.5 N.D.
phage phage_bap4 N.D. +0.3 +3.7 -0.4 N.D.
phage phage_bap4 N.D. +0.4 +3.9 -0.1 N.D.
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