Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF97 and GFF98 are separated by 26 nucleotidesGFF98 and GFF99 are separated by 8 nucleotidesGFF99 and GFF100 are separated by 116 nucleotidesGFF100 and GFF101 overlap by 4 nucleotides GFF97 - Chaperone protein EcpD, at 80,755 to 81,438 GFF97 GFF98 - FIG100795: Fimbriae usher protein StiC, at 81,465 to 84,011 GFF98 GFF99 - Putative fimbriae, at 84,020 to 85,099 GFF99 GFF100 - ABC-type multidrug transport system, permease component, at 85,216 to 85,986 GFF100 GFF101 - ABC-type multidrug transport system, ATPase component, at 85,983 to 86,909 GFF101
Group Condition GFF97 GFF98 GFF99 GFF100 GFF101
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI -0.0 -0.1 -0.1 -0.3 -0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.1 -0.1 -0.2 -0.1 -0.3
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.2 -0.1 -0.2 +0.1 -0.2
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI +0.1 +0.0 -0.0 -0.3 -0.1
phage LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI +0.2 -0.0 -0.1 -0.2 -0.1
micoeukaryotes C.elegans, mixed culture-2 -0.0 +0.0 -0.0 -0.4 +0.1
phage 6F2_phage 15 MOI +0.2 +0.0 -0.1 +0.2 -0.5
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 -0.1 +0.2 +0.2 -0.4
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI +0.2 -0.0 -0.1 -0.1 +0.0
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.1 +0.3 -0.2 -0.2 +0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.3 -0.1 +0.0 +0.4 +0.0
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI +0.0 +0.0 +0.1 +0.2 -0.3
phage LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI +0.2 +0.0 -0.2 -0.0 +0.0
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.2 -0.0 +0.3 +0.1 -0.2
lb_plus_sm_buffer LB_plus_SM_buffer +0.1 +0.1 +0.1 -0.1 -0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.4 -0.1 -0.0 +0.2 -0.3
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.2 -0.0 +0.0 +0.3 +0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 +0.0 +0.1 +0.2 -0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.6 +0.0 +0.1 -0.1 -0.3
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.1 +0.0 +0.0 +0.4 -0.1
lb_plus_sm_buffer LB_plus_SM_buffer +0.3 +0.2 -0.0 -0.1 +0.0
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.2 +0.0 +0.1 +0.2 -0.1
phage LB_plus_SM_buffer with Br60_phage 0.000005 MOI +0.2 +0.0 +0.1 +0.2 -0.1
phage 6H2_phage 10 MOI; agar plate assay -0.1 +0.1 +0.1 +0.1 +0.4
nophagecontrol No phage control +0.2 +0.0 +0.1 +0.1 +0.1
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI +0.1 +0.1 +0.1 +0.0 +0.2
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI +0.3 +0.1 +0.1 +0.0 +0.1
phage Br60_phage 15 MOI +0.1 +0.0 +0.3 +0.2 +0.0
phage phi19h1_phage 15 MOI +0.3 +0.1 +0.1 +0.2 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.1 +0.7 +0.4 +1.4 -0.1
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