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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF983 and GFF984 are separated by 28 nucleotides
GFF984 and GFF985 are separated by 42 nucleotides
GFF985 and GFF986 are separated by 1 nucleotides
GFF986 and GFF987 are separated by 4 nucleotides
GFF983 - FIG00636713: repeated hypothetical protein, at 981,612 to 981,923
GFF983
GFF984 - FIG00636713: repeated hypothetical protein, at 981,952 to 982,242
GFF984
GFF985 - Phage shock protein C, at 982,285 to 982,665
GFF985
GFF986 - Phage shock protein B, at 982,667 to 982,933
GFF986
GFF987 - Phage shock protein A @ Suppressor of sigma54-dependent transcription, PspA-like, at 982,938 to 983,606
GFF987
Group
Condition
GFF983
GFF984
GFF985
GFF986
GFF987
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
+0.0
-0.2
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
-0.3
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.0
+0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
+0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.0
-0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.5
-0.1
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
-0.2
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.1
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
-0.2
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.3
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.4
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.2
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.1
+0.0
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
-0.1
-0.2
+0.1
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