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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF979 and GFF980 are separated by 51 nucleotides
GFF980 and GFF981 are separated by 117 nucleotides
GFF981 and GFF982 are separated by 28 nucleotides
GFF982 and GFF983 are separated by 28 nucleotides
GFF979 - hypothetical protein, at 979,969 to 980,466
GFF979
GFF980 - Sulfur acceptor protein => iron-sulfur cluster assembly SufE, at 980,518 to 980,952
GFF980
GFF981 - hypothetical protein, at 981,070 to 981,303
GFF981
GFF982 - FIG00636713: repeated hypothetical protein, at 981,332 to 981,583
GFF982
GFF983 - FIG00636713: repeated hypothetical protein, at 981,612 to 981,923
GFF983
Group
Condition
GFF979
GFF980
GFF981
GFF982
GFF983
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
N.D.
+0.0
-0.7
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
+0.2
-1.6
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
N.D.
-0.3
+0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
-0.6
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
N.D.
-0.3
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
N.D.
-0.3
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
N.D.
+0.1
-0.5
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
N.D.
+0.2
-0.7
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
N.D.
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
N.D.
-0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
N.D.
-0.0
+0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
N.D.
+0.0
+0.5
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
N.D.
-0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
N.D.
-0.0
-0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
-0.1
-0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
N.D.
+0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
+0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
N.D.
+0.1
+0.4
+0.2
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