Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_04915	PS417_04920	PS417_04925	PS417_04930	PS417_04935
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-4.6	-0.0	-0.6	+0.8	-0.6
stress	methylglyoxal 0.032 vol%	-2.4	-0.7	-0.2	-0.9	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.3	-0.3	-0.1	+0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.1	+0.1	+0.2	-0.1	-0.0
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.9	-0.2	-0.2	-0.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4	-0.8	+0.3	-0.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.3	+0.4	+0.0	-0.1	+0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.4	-0.3	-0.1	-0.6	-0.3
supernatant control	Vogels_fungal_media 0.1X	-1.7	+0.5	-0.2	-0.2	-0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.7	+0.0	+0.1	-0.1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0	-0.1	-0.4	-0.1	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	-0.3	-0.2	+0.4	+0.1
carbon source	L-Valine (C)	-0.7	-0.8	+0.4	-0.3	-0.2
seeds	Growth on radish seeds for 72 hours	-1.7	+0.2	-0.1	+0.3	+0.1
no stress control on plate	growth on LB_noSalt plate	-0.4	-1.2	+0.3	+0.4	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.3	-1.7	+0.1	+0.0	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3	+0.4	+0.0	-0.4	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.2	+0.7	-0.1	-0.2	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.4	+0.1	+0.8	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1	-0.7	+0.0	-0.4	+0.3
soil	soil sample 5; outgrowth in LB	+1.2	+0.6	-0.5	-0.0	-0.7
soil	soil sample 3; outgrowth in LB	+1.2	-0.7	+0.3	-0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	-0.7	+0.3	+0.2	+0.6
phage	P. simiae OR1 MOI 0.1	+1.5	+0.5	+0.2	-0.3	-0.7
nophagecontrol	Only library	+1.2	+0.8	-0.3	-0.3	-0.2
phage	JP1 MOI 10	+1.7	+0.6	-0.5	-0.7	+0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.8	+0.8	-0.2	+0.6	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.2	+0.5	+1.5	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	-0.8	+0.5	+0.4	+1.2
phage	P. simiae Grant Run MOI 10	+0.6	+1.1	-0.3	+0.9	+0.2