Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF958 and GFF959 are separated by 51 nucleotidesGFF959 and GFF960 are separated by 20 nucleotidesGFF960 and GFF961 are separated by 40 nucleotidesGFF961 and GFF962 are separated by 18 nucleotides GFF958 - ElaB protein, at 270,114 to 270,410 GFF958 GFF959 - Phage holin, at 270,462 to 271,187 GFF959 GFF960 - Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2), at 271,208 to 272,287 GFF960 GFF961 - Ribose-5-phosphate isomerase A (EC 5.3.1.6), at 272,328 to 273,041 GFF961 GFF962 - FIG00932012: hypothetical protein, at 273,060 to 273,707 GFF962
Group Condition GFF958 GFF959 GFF960 GFF961 GFF962
complex community Community=arabino-guar; Passage=4 -0.2 -2.1 N.D. N.D. -0.2
complex community Community=guar; Passage=4 +0.5 -1.8 N.D. N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -1.7 +1.0 N.D. N.D. -0.4
phage phage_bap4 -0.2 -0.7 N.D. N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 N.D. N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.4 N.D. N.D. -0.2
no phage control no phage control -0.0 -0.9 N.D. N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 +0.2 N.D. N.D. -0.5
no phage control no phage control +0.1 -0.4 N.D. N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.5 N.D. N.D. -0.1
phage phage_bap4 +0.2 -0.8 N.D. N.D. +0.2
complex community Community=Locust bean gum; Passage=1 +0.1 +0.2 N.D. N.D. -0.6
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 N.D. N.D. +0.3
phage phage_bap4 +0.4 -0.3 N.D. N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.4 +0.7 N.D. N.D. -0.4
complex community Community=guar; Passage=4 +0.7 +0.2 N.D. N.D. -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.5 N.D. N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.1 N.D. N.D. -0.1
complex community Community=guar; Passage=4 +0.5 -0.2 N.D. N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.4 N.D. N.D. -0.1
phage phage_bap4 +0.4 +0.3 N.D. N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.5 N.D. N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.4 N.D. N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.4 N.D. N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +1.0 N.D. N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.9 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.2 +1.6 N.D. N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 +1.4 N.D. N.D. +0.5
complex community Community=arabino-guar; Passage=4 +0.8 +1.1 N.D. N.D. -0.2
complex community Community=Kojac gum; Passage=4 +0.5 +1.5 N.D. N.D. -0.0
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