Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF94 and GFF95 are separated by 61 nucleotidesGFF95 and GFF96 are separated by 370 nucleotidesGFF96 and GFF97 are separated by 47 nucleotidesGFF97 and GFF98 are separated by 26 nucleotides GFF94 - Polysaccharide deacetylase, at 78,066 to 79,295 GFF94 GFF95 - Putative PTS system IIA component yadI (EC 2.7.1.69), at 79,357 to 79,797 GFF95 GFF96 - Cell wall surface anchor family protein, at 80,168 to 80,707 GFF96 GFF97 - Chaperone protein EcpD, at 80,755 to 81,438 GFF97 GFF98 - FIG100795: Fimbriae usher protein StiC, at 81,465 to 84,011 GFF98
Group Condition GFF94 GFF95 GFF96 GFF97 GFF98
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.2 -0.6 +0.1 -0.2 -0.0
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI -0.0 +0.1 -0.4 -0.0 -0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.1 -0.5 -0.2 +0.4 -0.1
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.1 -0.1 -0.4 +0.1 +0.0
lb_plus_sm_buffer LB_plus_SM_buffer +0.0 -0.1 -0.6 +0.3 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.1 -0.4 +0.3 +0.1 -0.0
phage 6H2_phage 10 MOI; agar plate assay -0.2 -0.2 +0.5 -0.1 +0.1
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.1 -0.4 +0.0 +0.2 +0.1
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.2 -0.3 +0.2 -0.1 +0.0
phage LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI +0.1 -0.1 -0.2 +0.3 +0.0
phage phi19h1_phage 15 MOI -0.1 -0.2 +0.3 +0.1 +0.0
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.1 +0.2 +0.2 -0.2 -0.0
phage phi19h1_phage 15 MOI -0.5 +0.3 +0.3 -0.1 +0.1
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI -0.2 +0.2 +0.2 +0.1 +0.1
nophagecontrol No phage control -0.1 +0.3 +0.2 +0.1 +0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.2 +0.7 +0.1 -0.3 -0.1
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.0 +0.3 +0.1 +0.2 +0.0
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.1 +0.1 +0.3 +0.2 +0.0
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI -0.2 +0.3 +0.4 +0.1 +0.0
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.3 -0.2 -0.3 +0.1 +0.7
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI -0.0 +0.3 +0.2 +0.1 +0.0
phage phi19h1_phage 15 MOI -0.2 +0.4 +0.2 +0.3 +0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI +0.1 +0.2 +0.4 +0.0 +0.0
phage LB_plus_SM_buffer with Br60_phage 0.000005 MOI +0.1 +0.3 +0.1 +0.2 +0.0
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.2 +0.2 +0.7 -0.2 -0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.1 +0.5 +0.4 +0.0 +0.0
phage 6F2_phage 15 MOI +0.1 +0.5 +0.1 +0.2 +0.0
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI -0.1 +0.5 +0.3 +0.3 +0.1
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.1 +0.7 +0.4 -0.1 +0.3
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.2 +0.6 +0.4 +0.6 +0.0
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