Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF956 and GFF957 are separated by 40 nucleotidesGFF957 and GFF958 are separated by 135 nucleotidesGFF958 and GFF959 are separated by 51 nucleotidesGFF959 and GFF960 are separated by 20 nucleotides GFF956 - hypothetical protein, at 268,706 to 268,828 GFF956 GFF957 - Aminobutyraldehyde dehydrogenase (EC 1.2.1.19), at 268,869 to 269,978 GFF957 GFF958 - ElaB protein, at 270,114 to 270,410 GFF958 GFF959 - Phage holin, at 270,462 to 271,187 GFF959 GFF960 - Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2), at 271,208 to 272,287 GFF960
Group Condition GFF956 GFF957 GFF958 GFF959 GFF960
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.2 -2.1 N.D.
complex community Community=guar; Passage=4 N.D. +0.1 +0.5 -1.8 N.D.
phage phage_bap4 N.D. -0.2 -0.2 -0.7 N.D.
no phage control no phage control N.D. +0.1 -0.0 -0.9 N.D.
phage phage_bap4 N.D. -0.1 +0.2 -0.8 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.3 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.0 -0.3 -0.4 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.7 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -1.7 +1.0 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.7 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 +0.1 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.0 -0.4 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.0 -0.3 +0.5 N.D.
phage phage_bap4 N.D. +0.1 +0.4 -0.3 N.D.
complex community Community=guar; Passage=4 N.D. -0.0 +0.5 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.4 +0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.4 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.3 +0.4 N.D.
complex community Community=guar; Passage=4 N.D. -0.2 +0.7 +0.2 N.D.
phage phage_bap4 N.D. -0.1 +0.4 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.0 +0.3 +0.4 N.D.
phage phage_bap4 N.D. +0.1 +0.3 +0.3 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.7 +1.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 +0.0 +0.9 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 +0.3 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 +0.0 +1.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 +0.5 +0.4 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.2 +1.6 N.D.
complex community Community=arabino-guar; Passage=4 N.D. -0.0 +0.8 +1.1 N.D.
complex community Community=Kojac gum; Passage=4 N.D. +0.1 +0.5 +1.5 N.D.
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