Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF939 and GFF940 are separated by 118 nucleotidesGFF940 and GFF941 are separated by 112 nucleotidesGFF941 and GFF942 overlap by 4 nucleotidesGFF942 and GFF943 are separated by 19 nucleotides GFF939 - Transcriptional regulator, AsnC family, at 252,868 to 253,365 GFF939 GFF940 - Permease of the drug/metabolite transporter (DMT) superfamily, at 253,484 to 254,392 GFF940 GFF941 - Transporter, LysE family, at 254,505 to 255,143 GFF941 GFF942 - Iron-sulfur cluster-binding protein, at 255,140 to 255,775 GFF942 GFF943 - Intracellular PHB depolymerase, at 255,795 to 257,237 GFF943
Group Condition GFF939 GFF940 GFF941 GFF942 GFF943
complex community Community=guar; Passage=4 -1.2 +0.0 -0.3 -0.1 -0.4
complex community Community=guar; Passage=4 -0.9 -0.0 -0.7 +0.4 -0.7
complex community Community=guar; Passage=4 -0.6 -0.3 -0.0 -0.2 -0.5
complex community Community=Locust bean gum; Passage=4 -0.7 -0.1 -0.3 -0.1 -0.3
complex community Community=Kojac gum; Passage=4 -0.1 -0.0 -0.1 -0.2 -0.8
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.0 -0.5 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.0 -0.1 -0.3 -0.5
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 -0.1 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.0 -0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 +0.1 -0.0 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 +0.1 -0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.0 +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.0 +0.0 +0.0 -0.7
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 -0.1 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.1 -0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.1 -0.1 -0.4
phage phage_bap4 -0.5 -0.2 +0.0 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.0 +0.1 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.1 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.0 -0.0 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 +0.1 -0.1 -0.5
complex community Community=guar; Passage=4 +0.5 +0.1 +0.0 -0.2 -0.7
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 +0.5 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 +0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.0 +0.0 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 +0.2 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.1 +0.1 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.1 +0.0 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.0 +0.2 +0.1 -0.5
complex community Community=arabino-guar; Passage=4 +0.2 +0.0 +0.1 +0.4 -0.3
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