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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF934 and GFF935 are separated by 401 nucleotides
GFF935 and GFF936 are separated by 63 nucleotides
GFF936 and GFF937 overlap by 1 nucleotides
GFF937 and GFF938 overlap by 4 nucleotides
GFF934 - Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3), at 247,107 to 248,651
GFF934
GFF935 - no description, at 249,053 to 249,244
GFF935
GFF936 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3), at 249,308 to 251,356
GFF936
GFF937 - Biotin synthase (EC 2.8.1.6), at 251,356 to 252,390
GFF937
GFF938 - Methylmalonyl-CoA epimerase (EC 5.1.99.1), at 252,387 to 252,878
GFF938
Group
Condition
GFF934
GFF935
GFF936
GFF937
GFF938
complex community
Community=arabino-guar; Passage=4
-5.2
-0.2
-5.4
-0.4
N.D.
complex community
Community=Kojac gum; Passage=4
-4.7
-0.8
-5.2
-0.3
N.D.
complex community
Community=guar; Passage=4
-4.8
-0.6
-5.5
-0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.9
-0.0
-5.1
-0.7
N.D.
complex community
Community=guar; Passage=4
-4.7
-0.2
-5.1
-0.6
N.D.
complex community
Community=arabino-guar; Passage=4
-4.7
-0.4
-5.3
-0.1
N.D.
complex community
Community=guar; Passage=4
-4.5
-0.2
-5.5
-0.2
N.D.
complex community
Community=guar; Passage=4
-4.7
-0.1
-5.1
-0.3
N.D.
complex community
Community=arabino-guar; Passage=4
-4.4
-0.1
-5.4
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.2
-0.2
-5.0
-0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.6
-0.2
-4.8
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.8
-0.4
-4.4
+0.1
N.D.
complex community
Community=arabino-guar; Passage=4
-4.8
+0.4
-4.8
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-1.2
-0.1
-0.6
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.6
-0.2
-0.2
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
-0.0
-0.5
-0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.2
-0.3
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.5
+0.0
-0.5
-0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.2
-0.4
-0.7
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.7
-0.0
-0.3
-0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.6
-0.0
-0.1
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
-0.1
-0.1
-0.5
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.7
-0.3
-0.4
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
-0.3
-0.1
-0.5
N.D.
complex community
Community=Kojac gum; Passage=1
-0.5
-0.1
-0.5
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
+0.0
-0.3
-0.6
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.8
+0.2
-0.5
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
+0.1
-0.1
-0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.4
+0.2
-0.1
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.1
-0.2
-0.6
N.D.
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