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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF933 and GFF934 are separated by 37 nucleotides
GFF934 and GFF935 are separated by 401 nucleotides
GFF935 and GFF936 are separated by 63 nucleotides
GFF936 and GFF937 overlap by 1 nucleotides
GFF933 - YgfD: protein that forms a complex with the methylmalonyl-CoA mutase in a pathway for conversion of succinyl-CoA to propionyl-CoA, at 246,020 to 247,069
GFF933
GFF934 - Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3), at 247,107 to 248,651
GFF934
GFF935 - no description, at 249,053 to 249,244
GFF935
GFF936 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3), at 249,308 to 251,356
GFF936
GFF937 - Biotin synthase (EC 2.8.1.6), at 251,356 to 252,390
GFF937
Group
Condition
GFF933
GFF934
GFF935
GFF936
GFF937
complex community
Community=Locust bean gum; Passage=4
-1.8
-4.9
-0.0
-5.1
-0.7
complex community
Community=arabino-guar; Passage=4
+0.0
-5.2
-0.2
-5.4
-0.4
complex community
Community=arabino-guar; Passage=4
-0.6
-4.7
-0.4
-5.3
-0.1
complex community
Community=Kojac gum; Passage=4
-0.1
-4.7
-0.8
-5.2
-0.3
complex community
Community=guar; Passage=4
-0.3
-4.7
-0.2
-5.1
-0.6
complex community
Community=guar; Passage=4
-0.6
-4.7
-0.1
-5.1
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.9
-4.2
-0.2
-5.0
-0.5
complex community
Community=guar; Passage=4
+0.2
-4.8
-0.6
-5.5
-0.0
complex community
Community=arabino-guar; Passage=4
-0.5
-4.4
-0.1
-5.4
-0.2
complex community
Community=guar; Passage=4
+0.0
-4.5
-0.2
-5.5
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.7
-4.8
-0.4
-4.4
+0.1
complex community
Community=arabino-guar; Passage=4
-1.1
-4.8
+0.4
-4.8
+0.3
complex community
Community=Locust bean gum; Passage=4
-0.0
-4.6
-0.2
-4.8
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
-0.5
+0.0
-0.5
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.2
-0.2
-0.4
-0.7
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
-1.2
-0.1
-0.6
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.6
-0.0
-0.5
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.6
-0.2
-0.2
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.6
-0.0
-0.1
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.6
-0.1
-0.1
-0.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.7
-0.3
-0.4
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.4
-0.2
-0.3
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.3
+0.0
-0.3
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.7
-0.0
-0.3
-0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.8
+0.2
-0.5
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.6
+0.1
-0.1
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.2
+0.1
-0.2
-0.6
complex community
Community=Kojac gum; Passage=1
+0.1
-0.5
-0.1
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.3
-0.3
-0.1
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.4
+0.2
-0.1
-0.6
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