Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF930 and GFF931 are separated by 128 nucleotidesGFF931 and GFF932 are separated by 10 nucleotidesGFF932 and GFF933 overlap by 7 nucleotidesGFF933 and GFF934 are separated by 37 nucleotides GFF930 - Transcriptional regulator, GntR family, at 242,607 to 243,248 GFF930 GFF931 - Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2), at 243,377 to 245,539 GFF931 GFF932 - Acetyltransferase, GNAT family, at 245,550 to 246,026 GFF932 GFF933 - YgfD: protein that forms a complex with the methylmalonyl-CoA mutase in a pathway for conversion of succinyl-CoA to propionyl-CoA, at 246,020 to 247,069 GFF933 GFF934 - Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3), at 247,107 to 248,651 GFF934
Group Condition GFF930 GFF931 GFF932 GFF933 GFF934
complex community Community=Locust bean gum; Passage=4 -0.4 -1.8 -1.5 -1.8 -4.9
complex community Community=guar; Passage=4 -0.1 -1.3 -1.7 -0.6 -4.7
complex community Community=Locust bean gum; Passage=4 -0.3 -1.3 -1.0 -0.7 -4.8
complex community Community=Locust bean gum; Passage=4 +0.0 -2.0 -1.4 -0.0 -4.6
complex community Community=guar; Passage=4 -0.2 -1.8 -1.3 +0.2 -4.8
complex community Community=Locust bean gum; Passage=4 -0.1 -1.8 -0.9 -0.9 -4.2
complex community Community=arabino-guar; Passage=4 -0.2 -1.0 -1.2 -0.6 -4.7
complex community Community=guar; Passage=4 -0.0 -1.8 -0.8 -0.3 -4.7
complex community Community=Kojac gum; Passage=4 -0.0 -1.6 -1.1 -0.1 -4.7
complex community Community=arabino-guar; Passage=4 -0.3 -0.9 -0.2 -1.1 -4.8
complex community Community=arabino-guar; Passage=4 -0.8 -1.0 -0.3 +0.0 -5.2
complex community Community=arabino-guar; Passage=4 -0.8 -0.7 -0.3 -0.5 -4.4
complex community Community=guar; Passage=4 -0.1 -1.6 -0.5 +0.0 -4.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.4 -0.6 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 -1.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.1 -0.6 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.2 -0.1 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.3 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.1 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.0 -0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.1 -0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 -0.0 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.3 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 +0.5 +0.2 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.2 -0.3 +0.2 -0.4
phage phage_bap4 +0.2 +0.1 -0.8 +0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 +0.4 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.4 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 +0.5 +0.2 -0.4
no phage control no phage control +0.4 +0.0 -0.3 +0.4 -0.1
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