Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF920 and GFF921 are separated by 47 nucleotidesGFF921 and GFF922 are separated by 22 nucleotidesGFF922 and GFF923 are separated by 177 nucleotidesGFF923 and GFF924 are separated by 100 nucleotides GFF920 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 232,765 to 233,994 GFF920 GFF921 - Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19), at 234,042 to 235,331 GFF921 GFF922 - hypothetical protein, at 235,354 to 235,749 GFF922 GFF923 - Chromosome partition protein smc, at 235,927 to 236,310 GFF923 GFF924 - hypothetical protein, at 236,411 to 237,208 GFF924
Group Condition GFF920 GFF921 GFF922 GFF923 GFF924
complex community Community=arabino-guar; Passage=4 -0.9 -0.4 +0.1 -0.9 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 +0.3 -1.6 -0.2
complex community Community=arabino-guar; Passage=4 +0.0 -0.4 -0.3 -1.0 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.2 -0.5 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.0 -0.1 -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 -0.9 -0.1 +0.3 +0.5 -0.7
phage phage_bap4 +0.1 +0.0 -0.1 -0.5 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.0 -0.2 -0.4 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.1 -0.3 -0.3 -0.0
complex community Community=Locust bean gum; Passage=4 +0.4 +0.1 -0.3 -0.8 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 +0.1 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 +0.3 +0.1 -0.2 -0.7 -0.1
phage phage_bap4 -0.1 +0.1 -0.0 -0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.2 -0.3 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.0 +0.0 -0.3 +0.1
no phage control no phage control -0.2 +0.1 +0.1 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.2 -0.5 +0.1
complex community Community=guar; Passage=4 -0.2 +0.1 -0.0 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.2 -0.6 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 -0.3 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.1 -0.1 +0.5 +0.0
complex community Community=Kojac gum; Passage=4 +0.2 +0.3 -0.1 +0.4 -0.9
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.0 -0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.1 +0.1 +0.3 +0.2
complex community Community=guar; Passage=4 -0.3 +0.2 +0.0 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.2 -0.2 +0.2 +0.2
no phage control no phage control -0.1 +0.2 +0.2 +0.2 +0.1
complex community Community=guar; Passage=4 +0.4 +0.3 +0.1 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.7 +0.2 +0.5 +0.7 -0.2
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