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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF916 and GFF917 overlap by 11 nucleotides
GFF917 and GFF918 are separated by 3 nucleotides
GFF918 and GFF919 are separated by 120 nucleotides
GFF919 and GFF920 are separated by 204 nucleotides
GFF916 - RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE), at 94,800 to 95,042
GFF916
GFF917 - RelE/StbE replicon stabilization toxin, at 95,032 to 95,316
GFF917
GFF918 - Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4), at 95,320 to 95,784
GFF918
GFF919 - Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2), at 95,905 to 98,043
GFF919
GFF920 - FIG01045722: hypothetical protein, at 98,248 to 98,418
GFF920
Group
Condition
GFF916
GFF917
GFF918
GFF919
GFF920
phage
6H2_phage 10 MOI; agar plate assay
-1.6
-0.3
-0.5
+0.1
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.7
-0.2
-0.1
-0.4
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-1.0
-0.4
-0.1
+0.1
N.D.
phage
phi19h1_phage 15 MOI
-0.8
-0.2
+0.1
-0.0
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-0.9
-0.1
+0.4
-0.2
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.1
-0.3
-0.3
-0.3
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.8
+0.4
-0.5
+0.3
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 18.75 MOI
-0.5
+0.4
-0.3
-0.1
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.7
+0.5
-0.0
-0.1
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.1
+0.4
-0.5
-0.0
N.D.
phage
Ffm_phage 10 MOI; agar plate assay
+0.7
-0.1
-0.7
+0.0
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-0.5
+0.7
-0.0
+0.1
N.D.
nophagecontrol
No phage control
+0.6
+0.3
-0.4
-0.1
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+1.0
-0.2
-0.4
+0.1
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.7
-0.1
-0.3
+0.2
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.3
+0.3
+0.1
+0.3
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.7
-0.4
+0.3
+0.0
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.3
+0.5
-0.2
-0.1
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.7
+0.2
-0.2
-0.0
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.8
-0.1
+0.1
+0.0
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
+0.7
+0.1
+0.2
-0.1
N.D.
phage
6F2_phage 15 MOI
+0.7
+0.4
-0.1
-0.1
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
+1.2
-0.0
-0.2
+0.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.5
+0.3
+0.1
+0.2
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
+0.6
+0.3
+0.2
+0.1
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.1
+0.6
+0.5
-0.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.7
+0.3
-0.1
+0.3
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.6
+0.0
+0.6
+0.1
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+1.3
-0.3
+0.1
+0.3
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.1
+2.4
-0.5
+0.6
N.D.
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