Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF915 and GFF916 are separated by 18 nucleotidesGFF916 and GFF917 are separated by 54 nucleotidesGFF917 and GFF918 are separated by 25 nucleotidesGFF918 and GFF919 are separated by 129 nucleotides GFF915 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 226,528 to 227,472 GFF915 GFF916 - Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2), at 227,491 to 229,110 GFF916 GFF917 - hypothetical protein, at 229,165 to 230,265 GFF917 GFF918 - Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), at 230,291 to 231,646 GFF918 GFF919 - hypothetical protein, at 231,776 to 232,744 GFF919
Group Condition GFF915 GFF916 GFF917 GFF918 GFF919
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 -0.7 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.6 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.0 -0.8 -0.0 -0.1
complex community Community=guar; Passage=4 -0.2 -0.4 +0.2 -0.5 +0.0
complex community Community=guar; Passage=4 -0.0 -0.7 +0.4 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.0 -0.5 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 -0.8 +0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.4 -0.1 +0.1
phage phage_bap4 -0.1 -0.3 -0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.3 +0.2 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.4 -0.5 +0.1 -0.2
phage phage_bap4 -0.1 +0.1 -0.4 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.1 +0.2 -0.2 -0.1
complex community Community=guar; Passage=4 -0.3 +0.3 -0.2 -0.3 +0.3
phage phage_bap4 +0.3 -0.1 -0.4 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.3 +0.5 -0.6 -0.3 +0.2
no phage control no phage control +0.0 +0.1 -0.4 +0.2 +0.1
complex community Community=Locust bean gum; Passage=1 +0.3 +0.1 -0.1 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.6 +0.4 -1.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 -0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.4 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.0 +0.4 +0.4 -0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.0 -0.1 +0.3 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.6 +0.2 -0.3 +0.3
complex community Community=guar; Passage=4 +0.0 +0.2 -0.1 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.5 +0.2 +0.0
phage phage_bap4 +0.1 +0.1 +0.5 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.4 +0.3 +0.1 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.3 +0.4 +0.4 +0.3 -0.0
complex community Community=Locust bean gum; Passage=4 +0.2 +0.4 +0.9 +0.7 -0.1
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