Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF886 and GFF887 overlap by 4 nucleotidesGFF887 and GFF888 are separated by 49 nucleotidesGFF888 and GFF889 are separated by 62 nucleotidesGFF889 and GFF890 are separated by 9 nucleotides GFF886 - Protein of unknown function DUF1446, at 195,275 to 196,699 GFF886 GFF887 - Small uncharacterized protein Bpro_4170, at 196,696 to 197,064 GFF887 GFF888 - BUG/TctC family periplasmic protein, at 197,114 to 198,079 GFF888 GFF889 - FIG00349738: hypothetical protein, at 198,142 to 200,244 GFF889 GFF890 - Two-component system sensor histidine kinase, at 200,254 to 202,221 GFF890
Group Condition GFF886 GFF887 GFF888 GFF889 GFF890
complex community Community=arabino-guar; Passage=4 -1.0 -0.4 -0.5 +0.2 +0.2
complex community Community=Kojac gum; Passage=4 -0.8 -0.7 +0.4 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.5 -0.0 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 -0.0 -0.2 -0.0 +0.0
complex community Community=arabino-guar; Passage=4 -0.6 +0.5 -0.7 +0.3 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 -0.5 +0.4 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.6 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.3 +0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.5 -0.0 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.8 -0.9 -0.1 +0.1
complex community Community=guar; Passage=4 -0.2 +0.3 -0.2 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.5 +0.1 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 +0.3 -0.0 -0.1 +0.0
phage phage_bap4 -0.2 +0.3 +0.0 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.2 +0.2 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 -0.1 +0.3 +0.0
complex community Community=Kojac gum; Passage=1 -0.3 -0.1 +0.1 +0.2 +0.0
phage phage_bap4 -0.3 +0.3 +0.0 -0.0 -0.1
phage phage_bap4 -0.3 +0.3 -0.1 +0.1 -0.0
phage phage_bap4 -0.3 +0.3 +0.2 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.5 -0.1 +0.2 -0.0
phage phage_bap4 -0.1 +0.4 +0.2 -0.0 -0.2
complex community Community=Locust bean gum; Passage=1 -0.2 +0.2 +0.3 -0.0 +0.0
complex community Community=guar; Passage=4 -0.3 +0.4 +0.3 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.3 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.7 +0.5 +0.5 +0.1 +0.1
complex community Community=guar; Passage=4 +0.3 -0.3 +0.2 +0.3 -0.0
complex community Community=Locust bean gum; Passage=4 +0.6 -0.1 -0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.4 +0.0 -0.1 +0.0
phage phage_bap4 +0.3 +0.5 +0.0 +0.0 +0.0
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