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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF886 and GFF887 are separated by 94 nucleotides
GFF887 and GFF888 are separated by 42 nucleotides
GFF888 and GFF889 overlap by 4 nucleotides
GFF889 and GFF890 are separated by 204 nucleotides
GFF886 - Phenylalanine-4-hydroxylase (EC 1.14.16.1), at 877,745 to 878,611
GFF886
GFF887 - Transcriptional regulator, AsnC family, at 878,706 to 879,191
GFF887
GFF888 - Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190), at 879,234 to 880,220
GFF888
GFF889 - Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190), at 880,217 to 881,212
GFF889
GFF890 - Alcohol dehydrogenase (EC 1.1.1.1), at 881,417 to 882,424
GFF890
Group
Condition
GFF886
GFF887
GFF888
GFF889
GFF890
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.4
-0.2
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.2
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.3
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.2
-0.2
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.1
-0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
-0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
-0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.2
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
+0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.2
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
+0.3
+0.3
+0.1
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