Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_04460 and PS417_04470 are separated by 718 nucleotidesPS417_04470 and PS417_04475 are separated by 194 nucleotidesPS417_04475 and PS417_04480 are separated by 57 nucleotidesPS417_04480 and PS417_04485 are separated by 182 nucleotides PS417_04460: PS417_04460 - malate:quinone oxidoreductase, at 988,699 to 990,207 _04460 PS417_04470: PS417_04470 - hypothetical protein, at 990,926 to 991,159 _04470 PS417_04475: PS417_04475 - hypothetical protein, at 991,354 to 991,941 _04475 PS417_04480: PS417_04480 - hypothetical protein, at 991,999 to 992,208 _04480 PS417_04485: PS417_04485 - hypothetical protein, at 992,391 to 992,648 _04485
Group Condition PS417_04460 PS417_04470 PS417_04475 PS417_04480 PS417_04485
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -5.1 N.D. +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -4.9 N.D. +0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -4.4 N.D. +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -3.2 N.D. -0.4
stress R2A with Polymyxin B sulfate 0.003 mg/ml N.D. N.D. -2.8 N.D. -0.7
stress R2A with Polymyxin B sulfate 0.003 mg/ml N.D. N.D. -2.7 N.D. -0.6
stress R2A with Polymyxin B sulfate 0.003 mg/ml N.D. N.D. -3.2 N.D. -0.0
stress R2A with Polymyxin B sulfate 0.003 mg/ml N.D. N.D. -2.7 N.D. -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -2.7 N.D. +0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -2.3 N.D. +0.0
phage JP1 MOI 10 N.D. N.D. -2.4 N.D. +0.2
stress R2A with Polymyxin B sulfate 0.002 mg/ml N.D. N.D. -2.0 N.D. -0.2
supernatant control Vogels_fungal_media 0.1X N.D. N.D. -0.9 N.D. -1.1
stress Cisplatin 0.01 mg/ml N.D. N.D. -1.7 N.D. -0.3
stress R2A with Polymyxin B sulfate 0.002 mg/ml N.D. N.D. -1.4 N.D. -0.6
stress R2A with Polymyxin B sulfate 0.002 mg/ml N.D. N.D. -1.7 N.D. -0.3
stress R2A with Polymyxin B sulfate 0.002 mg/ml N.D. N.D. -1.2 N.D. -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -2.0 N.D. +0.3
stress L-Lysine 60 mM N.D. N.D. -1.3 N.D. -0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.7 N.D. +0.0
liquid stress 80% Methanol 3 mM; liquid stress N.D. N.D. -1.2 N.D. -0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.5 N.D. -0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.6 N.D. +0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. -1.5 N.D. +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.4 N.D. +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.3 N.D. +0.4
liquid stress 80% Methanol 3 mM; liquid stress N.D. N.D. -1.3 N.D. +0.3
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -1.1 N.D. +0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. N.D. -1.1 N.D. +0.6
root root sample 6; outgrowth in LB N.D. N.D. -1.4 N.D. +1.1
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