Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF876 and GFF877 overlap by 4 nucleotidesGFF877 and GFF878 are separated by 112 nucleotidesGFF878 and GFF879 are separated by 228 nucleotidesGFF879 and GFF880 are separated by 45 nucleotides GFF876 - hypothetical protein, at 184,848 to 186,509 GFF876 GFF877 - putative membrane protein, at 186,506 to 187,498 GFF877 GFF878 - COGs COG2343, at 187,611 to 188,000 GFF878 GFF879 - BUG/TctC family periplasmic protein, at 188,229 to 189,305 GFF879 GFF880 - conserved hypothetical protein, at 189,351 to 190,094 GFF880
Group Condition GFF876 GFF877 GFF878 GFF879 GFF880
complex community Community=guar; Passage=4 -0.3 -0.6 -0.6 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.5 +0.1 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 -0.1 -1.4 -0.4 +0.4 +0.4
complex community Community=Locust bean gum; Passage=4 +0.3 -0.6 -0.5 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.3 -0.2 -0.3 -0.7 +0.0
complex community Community=Locust bean gum; Passage=1 +0.0 -0.4 -0.1 +0.1 -0.5
complex community Community=guar; Passage=4 +0.4 +0.4 -0.5 +0.0 -1.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.5 -0.5 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 +0.1 -0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.1 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 +0.3 -0.3 -0.5 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 +0.1 -0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.3 +0.3 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 +0.2 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.0 +0.1 +0.3 -0.5
phage phage_bap4 +0.0 +0.2 -0.1 +0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 -0.2 -0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 +0.3 -0.2 +0.2
no phage control no phage control -0.1 -0.4 +0.0 +0.2 +0.4
complex community Community=guar; Passage=4 +0.5 +0.0 -0.3 -0.3 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.2 +0.2 +0.3 +0.0
complex community Community=guar; Passage=4 +0.4 -0.4 +0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 +0.1 -0.1 +0.3
phage phage_bap4 +0.3 -0.0 -0.0 +0.2 +0.2
complex community Community=Kojac gum; Passage=4 +0.3 +0.7 +0.2 +0.1 -0.5
phage phage_bap4 +0.0 +0.1 +0.1 +0.3 +0.3
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 +0.2 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.1 +0.1 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.0 +0.5 -0.4 +0.4 +0.3
complex community Community=arabino-guar; Passage=4 +0.3 +0.5 -0.5 +0.3 +0.6
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