Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF876 and GFF877 are separated by 78 nucleotidesGFF877 and GFF878 are separated by 247 nucleotidesGFF878 and GFF879 are separated by 64 nucleotidesGFF879 and GFF880 overlap by 1 nucleotides GFF876 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 601,468 to 602,676 GFF876 GFF877 - Butyryl-CoA dehydrogenase (EC 1.3.99.2), at 602,755 to 603,891 GFF877 GFF878 - Acyclic terpenes utilization regulator AtuR, TetR family, at 604,139 to 604,648 GFF878 GFF879 - Electron transfer flavoprotein, beta subunit, at 604,713 to 605,462 GFF879 GFF880 - Electron transfer flavoprotein, alpha subunit, at 605,462 to 606,400 GFF880
Group Condition GFF876 GFF877 GFF878 GFF879 GFF880
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.5 -0.2 N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 +0.1 -0.6 N.D. -0.0
carbon source Ying_Others16 rep C; time point 3 +0.0 -0.3 -0.1 N.D. -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.3 -0.1 N.D. +0.0
carbon source Ying_sugar7 rep C; time point 3 +0.1 -0.3 -0.2 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.1 -0.5 +0.2 N.D. +0.0
carbon source Ying_Others16 rep A; time point 3 +0.2 +0.0 -0.3 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 +0.1 -0.4 N.D. -0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.0 -0.4 +0.2 N.D. -0.1
carbon source Ying_all64 rep A; time point 2 -0.2 -0.2 +0.1 N.D. +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 -0.0 -0.2 N.D. -0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.2 -0.2 -0.2 N.D. +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.0 -0.2 +0.2 N.D. -0.1
carbon source Ying_Others16 rep B; time point 1 -0.1 -0.2 +0.3 N.D. -0.1
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.2 +0.2 N.D. -0.2
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -0.3 +0.3 N.D. -0.1
carbon source Ying_sugar7 rep A; time point 3 -0.1 -0.3 +0.3 N.D. +0.1
carbon source Ying_all64 rep B; time point 1 -0.0 -0.3 +0.5 N.D. -0.2
carbon source Ying_sugar7 rep C; time point 1 +0.2 -0.0 +0.1 N.D. -0.2
carbon source Ying_sugar7 rep B; time point 1 -0.1 -0.1 +0.3 N.D. -0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.0 -0.2 +0.4 N.D. +0.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 -0.1 +0.4 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.0 +0.4 N.D. -0.2
carbon source Ying_sugar7 rep A; time point 1 -0.0 +0.2 +0.2 N.D. +0.1
carbon source Ying_Others16 rep C; time point 1 +0.1 +0.2 +0.4 N.D. -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.0 +0.0 +0.5 N.D. +0.1
carbon source Ying_all64 rep C; time point 2 +0.0 +0.6 +0.6 N.D. -0.5
carbon source Ying_Nucleobase14 rep C; time point 1 +0.2 +0.4 +0.1 N.D. +0.0
carbon source Ying_all64 rep C; time point 1 +0.1 +0.1 +0.4 N.D. +0.2
carbon source Ying_all64 rep C; time point 3 -0.0 +0.8 +1.0 N.D. -0.4
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