Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF857 and GFF858 are separated by 152 nucleotidesGFF858 and GFF859 are separated by 16 nucleotidesGFF859 and GFF860 are separated by 237 nucleotidesGFF860 and GFF861 overlap by 17 nucleotides GFF857 - no description, at 164,118 to 164,975 GFF857 GFF858 - Copper tolerance protein, at 165,128 to 165,622 GFF858 GFF859 - Lactoylglutathione lyase (EC 4.4.1.5), at 165,639 to 166,031 GFF859 GFF860 - Cocaine esterase (EC 3.1.1.-), at 166,269 to 168,110 GFF860 GFF861 - S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase, at 168,094 to 169,617 GFF861
Group Condition GFF857 GFF858 GFF859 GFF860 GFF861
complex community Community=Kojac gum; Passage=4 +0.2 N.D. -3.2 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. -2.0 -0.1 -0.9
complex community Community=Locust bean gum; Passage=4 +0.6 N.D. -3.0 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 N.D. -1.3 -0.2 -0.2
phage phage_bap4 -0.2 N.D. -1.0 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.3 N.D. -0.6 -0.8 +0.0
complex community Community=guar; Passage=4 -0.7 N.D. -0.2 -0.2 +0.1
phage phage_bap4 -0.1 N.D. -0.7 +0.0 -0.2
phage phage_bap4 +0.1 N.D. -0.8 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.6 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 N.D. -0.9 -0.1 -0.1
phage phage_bap4 +0.2 N.D. -1.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.7 +0.1 -0.2
phage phage_bap4 +0.1 N.D. -0.7 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. -0.7 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. -0.3 -0.1 -0.5
complex community Community=guar; Passage=4 +0.4 N.D. -0.5 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 N.D. -0.5 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. -0.5 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 N.D. -0.6 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 N.D. -0.4 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. -0.8 +0.1 +0.4
complex community Community=guar; Passage=4 +0.4 N.D. -0.2 -0.6 +0.4
complex community Community=arabino-guar; Passage=4 +0.5 N.D. +0.3 -0.6 -0.0
complex community Community=arabino-guar; Passage=4 -0.2 N.D. -0.3 +0.4 +0.4
complex community Community=guar; Passage=4 +0.1 N.D. +1.0 -0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 N.D. +0.4 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 N.D. +0.5 -0.3 +0.2
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. -0.3 +0.3 +0.7
complex community Community=arabino-guar; Passage=4 +0.4 N.D. +0.4 +0.1 +0.4
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