Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_04305	PS417_04310	PS417_04315	PS417_04320	PS417_04325
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.5	-0.9	-0.2	+0.5	N.D.
solid stress	Scopoletin 0.5 mM; solid stress	-0.9	-0.6	-0.5	-0.5	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.4	+0.2	-0.1	-0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.8	+0.0	-0.2	-0.4	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-2.0	+0.1	-0.1	-0.3	N.D.
phage	P. simiae ORA MOI 0.1	-0.9	-0.8	-0.8	+0.1	N.D.
stress	methylglyoxal 0.032 vol%	-2.3	+0.4	+0.0	-0.4	N.D.
seeds	Growth on radish seeds for 72 hours	-1.2	-0.7	-0.5	+0.3	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	+0.3	-0.2	-1.2	N.D.
liquid stress	Fraxetin 2 mM; liquid stress	-2.4	-0.0	+0.1	+0.6	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.1	+0.3	-0.7	-0.2	N.D.
phage	JP1 MOI 10	-1.7	+0.4	+0.2	+0.1	N.D.
carbon source	L-Valine (C)	-2.1	+0.2	+0.4	+0.5	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.0	+1.2	-1.5	-0.7	N.D.
soil	soil sample 3; outgrowth in LB	-1.1	+0.7	-0.0	-0.5	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.9	+0.3	-1.2	-0.3	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4	+0.7	-1.0	-0.3	N.D.
carbon source	Carbon source L-Ornithine 5 mM	+1.1	-0.6	-0.3	-0.3	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	-0.2	+1.2	-0.5	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	+0.8	-0.9	+0.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	+0.4	+0.3	+0.7	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.7	-0.1	-0.5	-0.5	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.1	+0.2	-0.8	+1.1	N.D.
seeds	Growth on radish seeds for 24 hours	+1.3	-0.2	-0.5	+0.2	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	+0.8	+0.1	-0.8	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+2.2	+0.1	-0.5	-0.0	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+0.9	-0.2	+0.6	N.D.
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+1.4	+0.5	+0.3	+0.1	N.D.
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.8	-0.1	+0.6	+0.1	N.D.
phage	JP1 MOI 1	+2.0	+0.9	-0.1	+0.3	N.D.