Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF846 and GFF847 are separated by 16 nucleotidesGFF847 and GFF848 are separated by 19 nucleotidesGFF848 and GFF849 are separated by 143 nucleotidesGFF849 and GFF850 are separated by 11 nucleotides GFF846 - hypothetical protein, at 155,492 to 156,025 GFF846 GFF847 - Acetyltransferase, at 156,042 to 156,548 GFF847 GFF848 - no description, at 156,568 to 157,011 GFF848 GFF849 - putative carboxylesterase, at 157,155 to 158,909 GFF849 GFF850 - Two-component transcriptional response regulator, LuxR family, at 158,921 to 159,538 GFF850
Group Condition GFF846 GFF847 GFF848 GFF849 GFF850
complex community Community=guar; Passage=4 N.D. +0.8 -2.4 -1.2 +0.5
complex community Community=arabino-guar; Passage=4 N.D. -1.0 -1.0 +0.4 -0.0
complex community Community=Kojac gum; Passage=1 N.D. -0.3 -0.4 -0.2 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -0.8 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.8 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 +0.4 -1.2 +0.3
complex community Community=Kojac gum; Passage=4 N.D. +0.5 -0.5 +0.2 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 -0.6 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.4 -0.6 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.7 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.5 +0.1 -0.1 -0.0
phage phage_bap4 N.D. -0.1 -0.6 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.6 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.4 -0.1 +0.0 +0.3
complex community Community=guar; Passage=4 N.D. -0.1 +0.4 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.3 -0.3 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 -0.2 +0.1 +0.6
phage phage_bap4 N.D. +0.0 -0.3 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.2 -0.2 -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 -0.2 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.5 +0.2 +0.2 +0.5
complex community Community=Locust bean gum; Passage=4 N.D. +0.4 +0.7 -0.3 -0.3
complex community Community=guar; Passage=4 N.D. +0.4 +0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.1 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 -0.0 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 -0.1 +0.3 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 +0.4 +0.2 +0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.0 +1.0 +0.2 -0.3
no phage control no phage control N.D. +0.3 -0.2 +0.1 +0.6
phage phage_bap4 N.D. +0.4 +0.3 +0.1 +0.2
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