Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF843 and GFF844 are separated by 6 nucleotidesGFF844 and GFF845 are separated by 90 nucleotidesGFF845 and GFF846 overlap by 4 nucleotidesGFF846 and GFF847 are separated by 16 nucleotides GFF843 - no description, at 152,121 to 153,215 GFF843 GFF844 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 153,222 to 154,661 GFF844 GFF845 - dTDP-glucose 4,6-dehydratase, at 154,752 to 155,495 GFF845 GFF846 - hypothetical protein, at 155,492 to 156,025 GFF846 GFF847 - Acetyltransferase, at 156,042 to 156,548 GFF847
Group Condition GFF843 GFF844 GFF845 GFF846 GFF847
complex community Community=arabino-guar; Passage=4 +0.0 -0.2 -2.6 N.D. -1.0
complex community Community=arabino-guar; Passage=4 -0.1 -0.8 -1.4 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.3 -1.6 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.6 -0.7 N.D. +0.1
complex community Community=guar; Passage=4 -0.3 -0.3 -0.5 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 -0.0 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.3 -0.3 N.D. -0.3
phage phage_bap4 -0.4 -0.2 -0.5 N.D. +0.1
phage phage_bap4 -0.3 -0.3 -0.1 N.D. -0.1
phage phage_bap4 +0.0 -0.5 -0.4 N.D. -0.1
no phage control no phage control -0.0 -0.4 -0.5 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.2 -0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 +0.1 +0.0 -0.5 N.D. -0.3
phage phage_bap4 -0.2 +0.1 -0.5 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.2 -0.9 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.4 -0.5 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.6 N.D. +0.0
complex community Community=arabino-guar; Passage=4 -0.6 +0.5 +0.1 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.4 N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.7 +0.2 -1.0 N.D. -0.0
no phage control no phage control +0.3 -0.1 -0.4 N.D. +0.2
phage phage_bap4 -0.2 -0.2 +0.0 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.3 -0.4 N.D. +0.1
complex community Community=guar; Passage=4 +0.3 -0.6 +0.2 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 -0.2 +0.2 +0.5 N.D. +0.0
complex community Community=Kojac gum; Passage=4 +0.2 +0.3 -0.5 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.3 +0.3 N.D. +0.2
complex community Community=guar; Passage=4 +0.3 +0.0 +0.4 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.6 -0.3 +0.1 N.D. +0.4
complex community Community=guar; Passage=4 +0.3 +0.2 +0.4 N.D. +0.8
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