Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF832 and GFF833 are separated by 16 nucleotidesGFF833 and GFF834 are separated by 13 nucleotidesGFF834 and GFF835 are separated by 6 nucleotidesGFF835 and GFF836 overlap by 4 nucleotides GFF832 - hypothetical protein, at 138,624 to 138,956 GFF832 GFF833 - Proteins containing SET domain, at 138,973 to 139,461 GFF833 GFF834 - hypothetical protein, at 139,475 to 140,344 GFF834 GFF835 - Two-component system sensor histidine kinase, at 140,351 to 141,631 GFF835 GFF836 - Vitamin B12 ABC transporter, substrate-binding protein BtuF, at 141,628 to 142,569 GFF836
Group Condition GFF832 GFF833 GFF834 GFF835 GFF836
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -1.4 +0.1 -1.9
complex community Community=Kojac gum; Passage=4 N.D. -0.4 -0.3 +0.1 -1.8
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.2 +0.0 -2.0
complex community Community=arabino-guar; Passage=4 N.D. +0.3 -0.5 -0.1 -0.8
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.2 -0.3 -0.9
complex community Community=guar; Passage=4 N.D. -0.1 +0.6 +0.3 -1.9
complex community Community=guar; Passage=4 N.D. -0.0 +0.7 +0.0 -1.6
phage phage_bap4 N.D. -0.2 +0.0 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.2 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 -0.3 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 +0.3 +0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus N.D. -0.3 -0.2 -0.1 -0.1
phage phage_bap4 N.D. -0.1 +0.2 -0.0 -0.7
complex community Community=guar; Passage=4 N.D. +0.1 +0.3 -0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 -0.1 -0.3
complex community Community=guar; Passage=4 N.D. -0.2 +0.5 +0.5 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.1 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.3 +0.1 -0.3
phage phage_bap4 N.D. +0.0 +0.3 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 -0.1 +0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.1 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.2 -0.2 +0.1
no phage control no phage control N.D. +0.0 +0.3 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 +0.1 +0.2 +0.4
phage phage_bap4 N.D. +0.0 +0.3 -0.0 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 +0.2 -0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.2 +0.4 +0.1 +0.5
phage phage_bap4 N.D. +0.0 +0.5 -0.0 +0.3
phage phage_bap4 N.D. +0.1 +0.4 +0.1 +0.4
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