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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF830 and GFF831 are separated by 143 nucleotides
GFF831 and GFF832 are separated by 37 nucleotides
GFF832 and GFF833 are separated by 90 nucleotides
GFF833 and GFF834 are separated by 131 nucleotides
GFF830 - Adenylosuccinate synthetase (EC 6.3.4.4), at 12,445 to 13,743
GFF830
GFF831 - Nitrite-sensitive transcriptional repressor NsrR, at 13,887 to 14,375
GFF831
GFF832 - '3'-to-5' exoribonuclease RNase R' transl_table=11, at 14,413 to 16,851
GFF832
GFF833 - '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11, at 16,942 to 17,673
GFF833
GFF834 - FIG006163: hypothetical protein, at 17,805 to 18,209
GFF834
Group
Condition
GFF830
GFF831
GFF832
GFF833
GFF834
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
+0.3
+0.3
-2.0
-0.1
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
-0.4
-0.4
-0.4
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
N.D.
-0.2
-0.4
-0.7
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
N.D.
+0.4
-0.0
-0.5
-1.3
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
N.D.
-0.8
-0.2
-0.3
-0.2
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
N.D.
-1.1
-0.2
+0.1
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
N.D.
-0.4
-0.1
-0.3
-0.6
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
-0.3
-0.2
-0.4
-0.5
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.6
-0.2
-0.5
+0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
N.D.
+0.8
-0.8
-0.3
-0.8
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
N.D.
-0.5
-0.2
-0.6
+0.5
phage
6H2_phage 10 MOI; agar plate assay
N.D.
+0.4
+0.1
-0.5
-0.4
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
-0.6
+0.7
-0.5
+0.3
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+0.2
-0.4
-0.1
+0.4
phage
LB_plus_SM_buffer with Ffm_phage 18.75 MOI
N.D.
+0.6
-0.0
-1.0
+0.5
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
+0.1
-0.4
+0.1
+0.6
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
-0.8
+1.2
-0.8
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
-0.0
+1.0
-0.7
+0.3
phage
Ffm_phage 10 MOI; agar plate assay
N.D.
+0.5
-0.3
-0.3
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
N.D.
-0.3
+1.5
-0.6
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
-0.5
+0.8
+0.3
+0.4
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.4
+0.2
+0.4
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
+0.2
+0.1
+0.5
+0.6
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
-0.1
+0.5
+0.6
+0.6
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.0
+0.5
+0.3
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
-0.9
+2.4
-0.5
+0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
-0.2
+1.1
-0.0
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
-0.0
+1.3
+0.3
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
-0.1
+1.3
+0.5
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
+0.6
+1.6
-0.5
+0.7
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