Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1136 and GFF819 are separated by 269 nucleotidesGFF819 and GFF820 overlap by 14 nucleotidesGFF820 and GFF821 overlap by 26 nucleotidesGFF821 and GFF822 are separated by 16 nucleotides GFF1136 - tRNA-Gly-GCC, at 234 to 309 GFF1136 GFF819 - Epoxyqueuosine (oQ) reductase QueG, at 579 to 1,733 GFF819 GFF820 - NAD(P)HX epimerase / NAD(P)HX dehydratase, at 1,720 to 3,264 GFF820 GFF821 - TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 3,239 to 3,697 GFF821 GFF822 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 3,714 to 5,033 GFF822
Group Condition GFF1136 GFF819 GFF820 GFF821 GFF822
phage LB_plus_SM_buffer with Br60_phage 0.000005 MOI N.D. -0.4 -0.3 N.D. -0.4
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI N.D. -0.2 -0.2 N.D. -0.5
phage LB_plus_SM_buffer with P22_phage 15 MOI N.D. -0.2 -0.4 N.D. -0.3
phage LB_plus_SM_buffer with 6F2_phage 0.01875 MOI N.D. -0.3 -0.2 N.D. -0.3
phage LB_plus_SM_buffer with Ffm_phage 0.01875 MOI N.D. -0.4 -0.2 N.D. -0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI N.D. -0.5 +0.2 N.D. -0.4
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI N.D. -0.4 -0.1 N.D. -0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI N.D. -0.2 -0.1 N.D. -0.3
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI N.D. -0.2 -0.3 N.D. -0.2
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI N.D. -0.2 -0.0 N.D. -0.4
phage LB_plus_SM_buffer with Br60_phage 0.00005 MOI N.D. -0.2 -0.1 N.D. -0.2
phage 6H2_phage 10 MOI; agar plate assay N.D. -0.4 +0.2 N.D. -0.0
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI N.D. +0.0 -0.4 N.D. +0.2
phage LB_plus_SM_buffer with 6D2_phage 15 MOI N.D. +0.2 -0.2 N.D. -0.2
phage LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI N.D. -0.3 +0.1 N.D. +0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI N.D. +0.3 -0.2 N.D. -0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI N.D. +0.4 -0.3 N.D. -0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. -0.3 +0.2 N.D. +0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI N.D. +0.4 -0.0 N.D. -0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI N.D. -0.3 +0.8 N.D. -0.0
phage LB_plus_SM_buffer with 6C2_phage 15 MOI N.D. +0.2 +0.2 N.D. +0.2
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI N.D. +0.4 +0.1 N.D. +0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI N.D. +0.4 +0.0 N.D. +0.3
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI N.D. +0.6 +0.0 N.D. +0.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI N.D. +0.3 +0.2 N.D. +0.4
phage Ffm_phage 10 MOI; agar plate assay N.D. +0.2 +0.7 N.D. +0.1
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI N.D. +0.6 +0.2 N.D. +0.5
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI N.D. +0.1 +0.4 N.D. +0.9
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI N.D. +0.7 +0.6 N.D. +0.5
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI N.D. +0.4 +0.6 N.D. +0.8
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