Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_04150 and PS417_04155 are separated by 266 nucleotidesPS417_04155 and PS417_04160 overlap by 1 nucleotidesPS417_04160 and PS417_04165 overlap by 1 nucleotidesPS417_04165 and PS417_04170 are separated by 145 nucleotides PS417_04150: PS417_04150 - 30S ribosomal protein S9, at 932,748 to 933,140 _04150 PS417_04155: PS417_04155 - ubiquinol-cytochrome C reductase, at 933,407 to 934,000 _04155 PS417_04160: PS417_04160 - cytochrome B, at 934,000 to 935,211 _04160 PS417_04165: PS417_04165 - cytochrome C, at 935,211 to 935,990 _04165 PS417_04170: PS417_04170 - stringent starvation protein A, at 936,136 to 936,753 _04170
Group Condition PS417_04150 PS417_04155 PS417_04160 PS417_04165 PS417_04170
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -3.5
stress Gentamicin 0.008 mg/ml N.D. N.D. N.D. N.D. -3.3
phage Wcs_1 N.D. N.D. N.D. N.D. -3.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -3.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -3.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -2.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -2.7
stress L-Lysine 60 mM N.D. N.D. N.D. N.D. -2.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -2.4
phage P. simiae OR1 MOI 0.1 N.D. N.D. N.D. N.D. -2.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -2.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.9
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.8
phage Wcs_0.1 N.D. N.D. N.D. N.D. -1.8
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. N.D. -1.8
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. N.D. -1.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.7
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.7
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. N.D. -1.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.6
stress Choline Lysine 25 mM N.D. N.D. N.D. N.D. -1.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.6
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. N.D. -1.5
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.5
stress Paraquat dichloride 0.008 mg/ml N.D. N.D. N.D. N.D. -1.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -1.4
stress Phosphomycin 0.001 mg/ml N.D. N.D. N.D. N.D. +2.5
stress Phosphomycin 0.003 mg/ml N.D. N.D. N.D. N.D. +2.8
stress Neomycin 0.04 mg/ml N.D. N.D. N.D. N.D. +3.1
stress Phosphomycin 0.002 mg/ml N.D. N.D. N.D. N.D. +3.1
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