Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF811 and GFF812 are separated by 27 nucleotidesGFF812 and GFF813 are separated by 438 nucleotidesGFF813 and GFF814 are separated by 109 nucleotidesGFF814 and GFF815 overlap by 4 nucleotides GFF811 - Glutathione S-transferase (EC 2.5.1.18), at 116,403 to 117,281 GFF811 GFF812 - Putative reductase, at 117,309 to 117,899 GFF812 GFF813 - Transcriptional regulator PA0877, LysR family, at 118,338 to 119,282 GFF813 GFF814 - BUG/TctC family periplasmic protein, at 119,392 to 120,372 GFF814 GFF815 - COGs COG3777, at 120,369 to 121,286 GFF815
Group Condition GFF811 GFF812 GFF813 GFF814 GFF815
phage phage_bap4 -0.0 -0.1 -0.1 -0.1 -1.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 -0.3 -0.0 -0.8
complex community Community=Locust bean gum; Passage=4 -0.2 -0.3 +0.5 -0.1 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.0 +0.0 -0.0 -1.0
phage phage_bap4 +0.0 +0.1 -0.3 -0.1 -0.7
phage phage_bap4 -0.1 -0.0 -0.2 -0.1 -0.5
phage phage_bap4 -0.1 +0.0 -0.0 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 -0.9 +0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 +0.0 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 -0.0 -0.0 -0.6
phage phage_bap4 -0.0 -0.2 -0.0 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.0 -0.4 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 -0.5 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.1 -0.1 -0.1
no phage control no phage control -0.0 +0.1 +0.1 -0.0 -0.8
complex community Community=guar; Passage=4 -0.1 -0.0 -0.3 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.0 +0.1 -0.1 -0.5
complex community Community=guar; Passage=4 +0.2 -0.2 -0.1 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.0 +0.1 -0.1 -0.3
phage phage_bap4 -0.1 +0.1 +0.2 -0.0 -0.4
phage phage_bap4 -0.0 -0.0 +0.2 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.0 +0.3 +0.1 -0.4
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -0.4 -0.4 +0.6
complex community Community=Kojac gum; Passage=4 +0.0 -0.3 -0.1 +0.3 +0.5
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 +0.4 -0.1 +0.0
complex community Community=guar; Passage=4 -0.0 +0.3 +0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=1 +0.0 +0.1 +0.0 +0.1 +0.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.5 -0.0 -0.2 +1.6
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.1 -0.1 +0.9
complex community Community=guar; Passage=4 +0.2 +0.0 +0.2 +0.1 +0.8
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