Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF79 and GFF80 are separated by 42 nucleotidesGFF80 and GFF81 are separated by 137 nucleotidesGFF81 and GFF82 are separated by 8 nucleotidesGFF82 and GFF83 overlap by 4 nucleotides GFF79 - Dodecin, a flavin storage/sequestration protein, at 96,263 to 96,469 GFF79 GFF80 - no description, at 96,512 to 98,155 GFF80 GFF81 - Bll6900 protein, at 98,293 to 98,895 GFF81 GFF82 - Alkylhydroperoxidase AhpD domain protein, at 98,904 to 99,557 GFF82 GFF83 - Alkanal monooxygenase alpha chain (EC 1.14.14.3), at 99,554 to 100,615 GFF83
Group Condition GFF79 GFF80 GFF81 GFF82 GFF83
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.3 -0.2 -0.6
complex community Community=guar; Passage=4 N.D. +0.2 -0.5 -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.2 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 -0.3 -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.3 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 -0.3 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.3 +0.1 -0.4
phage phage_bap4 N.D. -0.1 +0.4 -0.2 -0.1
no phage control no phage control N.D. -0.2 +0.3 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.2 -0.3 +0.6
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 +0.0 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.1 +0.2 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.4 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.2 -0.2 +0.1 -0.0
complex community Community=guar; Passage=4 N.D. +0.5 -0.1 -0.6 +0.3
complex community Community=Kojac gum; Passage=4 N.D. +0.3 +0.3 -0.3 -0.1
phage phage_bap4 N.D. -0.1 +0.5 -0.1 -0.0
phage phage_bap4 N.D. -0.0 +0.2 -0.2 +0.3
no phage control no phage control N.D. -0.1 +0.6 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 +0.3 -0.1 +0.1
phage phage_bap4 N.D. -0.1 +0.4 -0.1 +0.2
complex community Community=guar; Passage=4 N.D. -0.0 +0.7 -0.1 -0.1
complex community Community=guar; Passage=4 N.D. +0.2 +0.5 +0.0 -0.3
no phage control no phage control N.D. +0.1 +0.4 -0.0 +0.0
phage phage_bap4 N.D. +0.1 +0.4 -0.1 +0.1
phage phage_bap4 N.D. +0.0 +0.2 +0.0 +0.2
phage phage_bap4 N.D. +0.1 +0.4 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.3 -0.7 +0.3 +0.7
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 +0.2 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 +0.5 -0.3 +0.2
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