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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF805 and GFF806 are separated by 23 nucleotides
GFF806 and GFF807 are separated by 5 nucleotides
GFF807 and GFF808 are separated by 357 nucleotides
GFF808 and GFF809 are separated by 55 nucleotides
GFF805 - hypothetical protein, at 109,519 to 110,433
GFF805
GFF806 - Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18), at 110,457 to 111,095
GFF806
GFF807 - FIG00003370: Multicopper polyphenol oxidase, at 111,101 to 111,859
GFF807
GFF808 - Polyhydroxyalkanoic acid synthase, at 112,217 to 113,974
GFF808
GFF809 - Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 114,030 to 115,208
GFF809
Group
Condition
GFF805
GFF806
GFF807
GFF808
GFF809
complex community
Community=Kojac gum; Passage=4
-0.1
+0.3
-0.9
-2.4
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
+0.0
-1.0
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.0
-0.3
-0.7
-0.3
complex community
Community=guar; Passage=4
+0.2
-0.4
-0.3
-0.8
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.6
-1.1
-0.7
+0.9
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.1
-0.5
-0.8
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.1
-0.7
-0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.1
-0.3
-0.7
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.1
-0.2
-0.8
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.1
-0.3
-0.7
-0.2
complex community
Community=guar; Passage=4
-0.2
-0.3
+0.4
-1.0
-0.1
phage
phage_bap4
+0.0
-0.0
-0.9
-0.0
-0.1
complex community
Community=guar; Passage=4
-0.2
+0.1
-0.9
-0.5
+0.4
vitamin
M9 with Supernatant from Cyptococcus
-0.2
+0.1
-0.5
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.1
+0.0
-0.6
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.0
+0.1
-0.5
-0.5
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.1
+0.2
-0.8
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.3
-0.3
-0.1
-0.8
+0.7
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.0
+0.1
-0.9
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-0.4
-0.4
-0.1
+0.1
complex community
Community=guar; Passage=4
+0.1
-0.4
-0.0
-0.6
+0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-0.4
-0.2
-0.2
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.1
+0.2
-0.8
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.0
-0.3
-0.0
-0.9
+0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.0
+0.3
-0.7
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.0
+0.5
-0.7
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.2
+0.7
-0.8
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.2
+0.4
-0.8
-0.1
complex community
Community=arabino-guar; Passage=4
-0.0
-0.4
+0.7
-0.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.2
+0.3
-0.8
+0.3
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