Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF78 and GFF79 are separated by 72 nucleotidesGFF79 and GFF80 are separated by 42 nucleotidesGFF80 and GFF81 are separated by 137 nucleotidesGFF81 and GFF82 are separated by 8 nucleotides GFF78 - Cytochrome c family protein, at 95,027 to 96,190 GFF78 GFF79 - Dodecin, a flavin storage/sequestration protein, at 96,263 to 96,469 GFF79 GFF80 - no description, at 96,512 to 98,155 GFF80 GFF81 - Bll6900 protein, at 98,293 to 98,895 GFF81 GFF82 - Alkylhydroperoxidase AhpD domain protein, at 98,904 to 99,557 GFF82
Group Condition GFF78 GFF79 GFF80 GFF81 GFF82
complex community Community=guar; Passage=4 -2.2 N.D. +0.5 -0.1 -0.6
complex community Community=arabino-guar; Passage=4 -1.2 N.D. +0.3 -0.7 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.5 N.D. -0.1 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 +0.0 N.D. -0.5 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 N.D. +0.2 -0.1 -0.3
complex community Community=guar; Passage=4 -1.2 N.D. -0.0 +0.7 -0.1
phage phage_bap4 -0.6 N.D. -0.1 +0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 N.D. -0.0 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 N.D. -0.0 +0.1 +0.2
complex community Community=guar; Passage=4 +0.6 N.D. +0.2 -0.5 -0.5
complex community Community=arabino-guar; Passage=4 +0.4 N.D. -0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 N.D. -0.0 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 -0.4 N.D. +0.3 +0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 N.D. -0.2 -0.2 +0.1
complex community Community=Kojac gum; Passage=1 -0.4 N.D. +0.1 +0.4 +0.0
phage phage_bap4 -0.2 N.D. -0.1 +0.5 -0.1
phage phage_bap4 -0.2 N.D. +0.1 +0.4 -0.2
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. +0.3 +0.5 -0.3
phage phage_bap4 +0.4 N.D. -0.1 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. -0.2 +0.3 +0.1
no phage control no phage control +0.1 N.D. -0.1 +0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 N.D. -0.0 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.6 N.D. +0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. +0.0 +0.3 -0.0
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. +0.2 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.5 N.D. +0.1 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.9 N.D. +0.2 -0.3 +0.0
complex community Community=arabino-guar; Passage=4 +0.6 N.D. +0.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +1.0 N.D. +0.1 -0.0 +0.0
complex community Community=guar; Passage=4 +1.2 N.D. +0.2 +0.5 +0.0
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