Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6 and GFF7 overlap by 4 nucleotidesGFF7 and GFF8 overlap by 4 nucleotidesGFF8 and GFF9 are separated by 19 nucleotidesGFF9 and GFF10 overlap by 8 nucleotides GFF6 - hypothetical protein, at 5,315 to 5,710 GFF6 GFF7 - no description, at 5,707 to 6,081 GFF7 GFF8 - RND efflux system, outer membrane lipoprotein, NodT family, at 6,078 to 7,592 GFF8 GFF9 - CzcABC family efflux RND transporter, transmembrane protein, at 7,612 to 10,707 GFF9 GFF10 - Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family, at 10,700 to 11,854 GFF10
Group Condition GFF6 GFF7 GFF8 GFF9 GFF10
complex community Community=arabino-guar; Passage=4 -0.5 -1.0 +0.1 +0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.5 -0.3 -0.8 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.7 +0.0 -0.1 +0.1 -0.3
phage phage_bap4 -0.0 -0.2 +0.1 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.3 -0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -0.0 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.2 -0.3 -0.1 -0.1
phage phage_bap4 +0.1 -0.3 -0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.0 +0.1 -0.0 -0.1
no phage control no phage control +0.1 +0.2 -0.2 -0.1 -0.3
phage phage_bap4 +0.3 -0.4 +0.1 -0.1 -0.3
phage phage_bap4 +0.2 -0.2 -0.0 -0.2 -0.1
complex community Community=guar; Passage=4 -0.0 +0.3 -0.7 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.3 -0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 +0.3 -0.0 -0.1
complex community Community=guar; Passage=4 +0.3 -0.1 -0.6 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 +0.5 +0.2 -1.0
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 -0.1 -0.0 +0.2
complex community Community=guar; Passage=4 -0.3 -0.3 +0.1 +0.2 +0.2
complex community Community=Locust bean gum; Passage=1 -0.4 -0.1 +0.4 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.9 -0.3 +0.0 -0.3
complex community Community=Kojac gum; Passage=1 -0.2 +0.1 +0.3 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.3 -0.2 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.3 -0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.3 -0.0 +0.1
complex community Community=Kojac gum; Passage=4 +0.0 +0.1 -0.2 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.1 +0.3 +0.0
complex community Community=guar; Passage=4 -0.2 +0.1 +0.6 -0.1 +0.5
complex community Community=Locust bean gum; Passage=4 -0.1 +0.6 -0.7 +0.2 +0.9
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 +0.1 -0.1 +0.5
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