Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF790 and GFF791 are separated by 7 nucleotidesGFF791 and GFF792 are separated by 30 nucleotidesGFF792 and GFF793 are separated by 138 nucleotidesGFF793 and GFF794 are separated by 16 nucleotides GFF790 - hypothetical protein, at 83,251 to 83,922 GFF790 GFF791 - RNA polymerase sigma factor RpoE, at 83,930 to 84,466 GFF791 GFF792 - putative FecR, at 84,497 to 85,504 GFF792 GFF793 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 85,643 to 98,458 GFF793 GFF794 - KEGG: RNA polymerase sigma-70 factor, ECF subfamily, at 98,475 to 99,029 GFF794
Group Condition GFF790 GFF791 GFF792 GFF793 GFF794
complex community Community=Locust bean gum; Passage=4 -1.1 -0.5 -0.3 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.3 -0.2 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.2 -0.2 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.6 -0.4 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.2 -0.5 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 -0.4 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.2 +0.0 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.4 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 -0.7 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.6 +0.0 -0.1
phage phage_bap4 +0.3 -0.5 -0.2 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.3 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.2 -0.2 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 +0.5 -0.1 -0.2 -0.2 -0.3
phage phage_bap4 +0.2 -0.3 -0.2 -0.0 +0.0
complex community Community=guar; Passage=4 -0.5 +0.5 -0.3 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 -0.3 +0.0 +0.1
complex community Community=guar; Passage=4 -0.3 +0.0 +0.2 -0.0 +0.3
complex community Community=Kojac gum; Passage=4 +1.1 -0.2 -0.7 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -0.3 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.2 -0.3 +0.0 +0.0
complex community Community=guar; Passage=4 -0.2 +0.2 +0.3 +0.0 +0.2
complex community Community=guar; Passage=4 +0.2 +0.4 -0.2 -0.0 +0.2
no phage control no phage control +0.3 -0.1 +0.2 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.2 -0.1 +0.1 +0.0
phage phage_bap4 +0.3 +0.0 +0.3 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.3 +0.1 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.2 +0.1 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.0 +0.8 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +1.2 -0.2 +0.1 +0.2
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