Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_03990 and PS417_03995 are separated by 204 nucleotidesPS417_03995 and PS417_04000 are separated by 2 nucleotidesPS417_04000 and PS417_04005 are separated by 49 nucleotidesPS417_04005 and PS417_04010 are separated by 479 nucleotides PS417_03990: PS417_03990 - ligand-gated channel protein, at 895,376 to 897,661 _03990 PS417_03995: PS417_03995 - Fe(II)-dependent oxygenase, at 897,866 to 898,546 _03995 PS417_04000: PS417_04000 - hypothetical protein, at 898,549 to 899,301 _04000 PS417_04005: PS417_04005 - ornithine decarboxylase, at 899,351 to 900,514 _04005 PS417_04010: PS417_04010 - glycine/betaine ABC transporter ATP-binding protein, at 900,994 to 902,151 _04010
Group Condition PS417_03990 PS417_03995 PS417_04000 PS417_04005 PS417_04010
solid stress Fraxetin 3 mM; solid stress -2.4 -1.6 -1.4 -0.3 -0.1
liquid stress Fraxetin 3 mM; liquid stress -2.1 -2.2 -1.6 +0.2 +0.5
liquid stress Fraxetin 3 mM; liquid stress -2.2 -1.3 -1.5 +0.3 +0.1
solid stress Fraxetin 3 mM; solid stress -1.8 -1.4 -1.1 -0.2 +0.1
solid stress Fraxetin 3 mM; solid stress -1.7 -1.4 -0.9 -0.2 +0.2
liquid stress Fraxetin 3 mM; liquid stress -1.9 -1.3 -1.1 +0.2 +0.2
liquid stress Fraxetin 3 mM; liquid stress -1.7 -1.2 -1.1 +0.2 -0.0
liquid stress Fraxetin 2 mM; liquid stress -0.8 -1.2 -0.7 +0.0 -0.3
liquid stress Fraxetin 3 mM; liquid stress -1.6 -0.9 -1.2 +0.2 +0.5
solid stress Fraxetin 2 mM; solid stress -1.2 -1.2 -0.4 -0.0 -0.0
solid stress Fraxetin 3 mM; solid stress -1.6 -0.5 -0.7 -0.2 +0.3
liquid stress Fraxetin 2 mM; liquid stress -0.7 -1.2 -0.7 +0.0 +0.2
solid stress Fraxetin 2 mM; solid stress -0.9 -1.0 -0.5 -0.1 +0.1
solid stress Fraxetin 1 mM; solid stress -0.8 -1.1 -0.2 +0.1 -0.2
solid stress Fraxetin 2 mM; solid stress -1.2 -0.7 -0.6 -0.1 +0.3
stress LB_noSalt with Chloride 1100 mM -0.1 -0.1 -0.2 -0.1 -1.7
solid stress Fraxetin 2 mM; solid stress -1.3 -0.5 -0.5 +0.0 +0.1
liquid stress Fraxetin 2 mM; liquid stress -0.8 -1.4 -0.6 +0.2 +0.4
solid stress Fraxetin 2 mM; solid stress -1.4 -0.7 -0.4 +0.1 +0.2
solid stress 80% Methanol 0.5 mM; solid stress -0.7 -0.9 -0.4 -0.2 +0.2
liquid stress Fraxetin 2 mM; liquid stress -0.6 -0.9 -0.5 -0.0 -0.0
phage P. simiae OR1 MOI 0.1 -0.2 +0.7 +0.0 -0.1 -2.5
solid stress Fraxetin 1 mM; solid stress -0.7 -1.1 -0.2 +0.1 -0.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.2 -1.2 +0.3 +0.1 -0.6
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.2 -0.2 +0.3 -0.6 -0.6
liquid stress Fraxetin 2 mM; liquid stress -0.8 -0.5 -0.7 +0.3 +0.3
rhizosphere rhizosphere sample 1; outgrowth in LB +0.1 -0.6 -0.4 +0.4 -0.6
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.1 +0.6 +0.2 -0.5 -1.0
seeds Growth on radish seeds for 72 hours +0.1 -0.5 +0.5 +0.3 -0.9
carbon source Gly-Glu (C) +0.0 +0.3 -0.1 +1.5 -0.2
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