Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_03985 and PS417_03990 are separated by 136 nucleotidesPS417_03990 and PS417_03995 are separated by 204 nucleotidesPS417_03995 and PS417_04000 are separated by 2 nucleotidesPS417_04000 and PS417_04005 are separated by 49 nucleotides PS417_03985: PS417_03985 - flavodoxin, at 892,714 to 895,239 _03985 PS417_03990: PS417_03990 - ligand-gated channel protein, at 895,376 to 897,661 _03990 PS417_03995: PS417_03995 - Fe(II)-dependent oxygenase, at 897,866 to 898,546 _03995 PS417_04000: PS417_04000 - hypothetical protein, at 898,549 to 899,301 _04000 PS417_04005: PS417_04005 - ornithine decarboxylase, at 899,351 to 900,514 _04005
Group Condition PS417_03985 PS417_03990 PS417_03995 PS417_04000 PS417_04005
liquid stress Fraxetin 3 mM; liquid stress -1.3 -2.1 -2.2 -1.6 +0.2
solid stress Fraxetin 3 mM; solid stress -0.4 -2.4 -1.6 -1.4 -0.3
liquid stress Fraxetin 3 mM; liquid stress -1.4 -2.2 -1.3 -1.5 +0.3
liquid stress Fraxetin 3 mM; liquid stress -1.2 -1.9 -1.3 -1.1 +0.2
liquid stress Fraxetin 3 mM; liquid stress -0.9 -1.7 -1.2 -1.1 +0.2
solid stress Fraxetin 3 mM; solid stress +0.0 -1.8 -1.4 -1.1 -0.2
liquid stress Fraxetin 3 mM; liquid stress -0.9 -1.6 -0.9 -1.2 +0.2
solid stress Fraxetin 3 mM; solid stress -0.1 -1.7 -1.4 -0.9 -0.2
solid stress Fraxetin 3 mM; solid stress -0.1 -1.6 -0.5 -0.7 -0.2
solid stress Fraxetin 2 mM; solid stress -0.1 -1.2 -1.2 -0.4 -0.0
liquid stress Fraxetin 2 mM; liquid stress -0.2 -0.7 -1.2 -0.7 +0.0
liquid stress Fraxetin 2 mM; liquid stress -0.1 -0.8 -1.2 -0.7 +0.0
liquid stress Fraxetin 2 mM; liquid stress -0.2 -0.8 -1.4 -0.6 +0.2
solid stress Fraxetin 2 mM; solid stress -0.1 -1.2 -0.7 -0.6 -0.1
solid stress Fraxetin 2 mM; solid stress -0.2 -0.9 -1.0 -0.5 -0.1
solid stress 80% Methanol 0.5 mM; solid stress -0.1 -0.7 -0.9 -0.4 -0.2
solid stress Fraxetin 2 mM; solid stress -0.1 -1.4 -0.7 -0.4 +0.1
solid stress Fraxetin 2 mM; solid stress -0.0 -1.3 -0.5 -0.5 +0.0
liquid stress Fraxetin 2 mM; liquid stress -0.1 -0.6 -0.9 -0.5 -0.0
solid stress Fraxetin 1 mM; solid stress -0.1 -0.7 -1.1 -0.2 +0.1
solid stress Fraxetin 1 mM; solid stress +0.1 -0.8 -1.1 -0.2 +0.1
liquid stress Fraxetin 2 mM; liquid stress -0.2 -0.8 -0.5 -0.7 +0.3
solid stress Fraxetin 1 mM; solid stress -0.0 -0.8 -0.7 -0.3 +0.0
solid stress Fraxetin 1 mM; solid stress -0.0 -0.7 -0.7 -0.2 +0.0
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.2 -0.2 -1.2 +0.3 +0.1
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +0.1 -0.6 -0.4 +0.4
phage JP1 MOI 10 +0.2 -0.1 +1.0 -0.2 -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +0.2 -0.5 +0.6 +0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -0.0 +0.6 +0.7 +0.4
carbon source Gly-Glu (C) -0.2 +0.0 +0.3 -0.1 +1.5
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PS417_03990
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PS417_04000
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