Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF783 and GFF784 are separated by 11 nucleotidesGFF784 and GFF785 are separated by 5 nucleotidesGFF785 and GFF786 are separated by 219 nucleotidesGFF786 and GFF787 are separated by 122 nucleotides GFF783 - no description, at 65,347 to 66,069 GFF783 GFF784 - KEGG: RNA polymerase sigma-70 factor, ECF subfamily, at 66,081 to 66,641 GFF784 GFF785 - Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system, at 66,647 to 67,636 GFF785 GFF786 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 67,856 to 80,332 GFF786 GFF787 - hypothetical protein, at 80,455 to 81,186 GFF787
Group Condition GFF783 GFF784 GFF785 GFF786 GFF787
complex community Community=arabino-guar; Passage=4 N.D. -3.2 -0.2 +0.0 +0.3
complex community Community=guar; Passage=4 N.D. -3.3 +0.3 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 N.D. -3.3 +0.4 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus N.D. -1.4 -0.5 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -1.9 -0.1 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -1.2 -0.5 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.8 -0.5 +0.0 -0.2
complex community Community=guar; Passage=4 N.D. -0.1 -0.9 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.8 -0.1 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.3 -0.5 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.7 -0.3 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.6 -0.3 -0.1 -1.3
complex community Community=Kojac gum; Passage=4 N.D. -0.7 +0.2 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -1.0 -0.2 -0.0 +0.3
complex community Community=guar; Passage=4 N.D. -0.9 -0.2 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.6 -0.4 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.3 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.4 -0.4 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.5 -0.4 -0.0 -0.2
phage phage_bap4 N.D. -0.6 +0.3 +0.0 +0.3
phage phage_bap4 N.D. -0.3 +0.2 +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.5 -0.3 -0.0 +0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.5 +0.6 +0.0 +0.4
phage phage_bap4 N.D. -0.3 +0.2 -0.0 +0.6
complex community Community=Locust bean gum; Passage=4 N.D. +1.1 -1.2 +0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus N.D. +0.9 +0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +1.0 -0.0 +0.0 +0.1
no phage control no phage control N.D. +0.8 -0.1 +0.1 +0.3
phage phage_bap4 N.D. +0.9 +0.0 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +1.6 -0.2 -0.1 +0.2
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