Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_03970 and PS417_03975 are separated by 11 nucleotidesPS417_03975 and PS417_03980 are separated by 44 nucleotidesPS417_03980 and PS417_03985 are separated by 99 nucleotidesPS417_03985 and PS417_03990 are separated by 136 nucleotides PS417_03970: PS417_03970 - 1-phosphofructokinase, at 888,387 to 889,307 _03970 PS417_03975: PS417_03975 - FruA, at 889,319 to 891,028 _03975 PS417_03980: PS417_03980 - alkaline phosphatase, at 891,073 to 892,614 _03980 PS417_03985: PS417_03985 - flavodoxin, at 892,714 to 895,239 _03985 PS417_03990: PS417_03990 - ligand-gated channel protein, at 895,376 to 897,661 _03990
Group Condition PS417_03970 PS417_03975 PS417_03980 PS417_03985 PS417_03990
carbon source D-Fructose (C) -2.9 -4.4 -0.2 -0.0 -0.1
carbon source D-Mannose (C) -3.6 -3.2 -0.0 -0.0 +0.0
carbon source D-Fructose (C) -3.0 -3.6 +0.0 -0.1 -0.0
carbon source D-Mannose (C) -2.6 -3.4 +0.1 +0.0 -0.1
rhizosphere rhizosphere sample 2; outgrowth in LB -4.9 +0.0 -0.2 +0.1 +0.0
liquid stress Fraxetin 3 mM; liquid stress -0.1 -0.2 -0.0 -1.4 -2.2
liquid stress Fraxetin 3 mM; liquid stress +0.2 -0.4 -0.1 -1.3 -2.1
solid stress Fraxetin 3 mM; solid stress -0.2 -1.0 +0.0 -0.1 -1.7
solid stress Fraxetin 3 mM; solid stress +0.6 -0.8 +0.1 -0.4 -2.4
liquid stress Fraxetin 3 mM; liquid stress +0.2 -0.5 +0.1 -0.9 -1.6
liquid stress Fraxetin 3 mM; liquid stress +0.4 -0.4 +0.3 -1.2 -1.9
liquid stress Fraxetin 3 mM; liquid stress +0.3 -0.2 -0.0 -0.9 -1.7
solid stress Fraxetin 3 mM; solid stress +0.0 -0.9 +0.1 +0.0 -1.8
carbon source L-Valine (C) -2.0 +0.0 -0.3 -0.0 +0.0
solid stress Fraxetin 2 mM; solid stress -0.6 -0.4 -0.1 -0.1 -1.2
solid stress Fraxetin 3 mM; solid stress +0.2 -0.6 -0.0 -0.1 -1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.8 +0.0 +0.1 +0.1 -0.2
soil soil sample 7; outgrowth in LB -1.8 +0.1 -0.2 +0.2 +0.1
solid stress Fraxetin 2 mM; solid stress +0.1 -0.4 +0.2 -0.1 -1.4
seeds Growth on radish seeds for 72 hours -1.1 -0.5 -0.1 -0.3 +0.4
soil soil sample 5; outgrowth in LB -2.0 +0.3 +0.1 +0.4 -0.0
carbon source D-Sorbitol (C) +0.7 -1.3 -0.1 -0.0 -0.1
phage P. simiae OR Antrim MOI 0.1 +1.0 +0.9 +0.3 -0.0 +0.0
phage JP1 MOI 1 +1.3 +0.6 +0.1 +0.1 +0.1
phage P. simiae Grant Run MOI 0.1 +1.2 +0.9 +0.2 +0.3 -0.1
phage P. simiae Grant Run MOI 10 +1.1 +0.7 +0.6 +0.1 +0.1
phage JP1 MOI 1 +1.3 +0.7 +0.5 +0.1 +0.1
phage JP1 MOI 0.1 +0.7 +1.2 +0.4 +0.3 +0.1
phage P. simiae OR Antrim MOI 10 +1.5 +0.7 +0.5 -0.1 +0.2
phage P. simiae OR Antrim MOI 10 +1.9 +0.7 +0.3 -0.1 +0.1
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PS417_03970
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PS417_03975
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PS417_03985
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PS417_03990
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