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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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500 nt
GFF774 and GFF775 are separated by 99 nucleotides
GFF775 and GFF776 are separated by 295 nucleotides
GFF776 and GFF777 are separated by 778 nucleotides
GFF777 and GFF778 are separated by 82 nucleotides
GFF774 - no description, at 48,302 to 48,508
GFF774
GFF775 - no description, at 48,608 to 48,874
GFF775
GFF776 - Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family, at 49,170 to 57,995
GFF776
GFF777 - no description, at 58,774 to 59,028
GFF777
GFF778 - Channel-forming transporter/cytolysins activator of TpsB family, at 59,111 to 60,865
GFF778
Group
Condition
GFF774
GFF775
GFF776
GFF777
GFF778
complex community
Community=arabino-guar; Passage=4
-0.3
-1.2
-0.0
-0.6
-0.1
complex community
Community=Kojac gum; Passage=4
+0.0
-1.6
-0.0
+0.2
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.8
-0.3
-0.0
-0.4
+0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
-0.9
+0.0
-0.2
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.1
-1.0
-0.2
+0.0
-0.2
complex community
Community=guar; Passage=4
-0.2
-0.3
-0.2
-0.3
-0.0
phage
phage_bap4
-0.2
-0.4
-0.0
-0.3
-0.1
complex community
Community=arabino-guar; Passage=4
+0.3
-0.9
-0.0
-0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.2
+0.0
-0.5
-0.1
complex community
Community=guar; Passage=4
-0.3
-0.3
+0.1
-0.3
+0.0
phage
phage_bap4
+0.2
-0.7
+0.0
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
+0.3
-0.0
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.2
-0.1
-0.4
-0.1
phage
phage_bap4
+0.3
-0.4
-0.1
-0.0
-0.0
phage
phage_bap4
+0.2
-0.3
+0.1
-0.2
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.6
-0.1
+0.1
+0.0
complex community
Community=guar; Passage=4
-0.0
+0.3
+0.0
-0.4
-0.2
no phage control
no phage control
+0.2
+0.2
-0.1
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.5
-0.1
-0.3
-0.0
complex community
Community=arabino-guar; Passage=4
+0.0
+0.3
+0.1
-0.3
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
+0.5
-0.0
-0.3
-0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.4
-0.0
-0.4
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
+0.4
-0.0
-0.2
-0.2
phage
phage_bap4
+0.4
-0.8
+0.3
+0.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.6
-0.0
-0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.5
+0.0
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.6
-0.0
+0.1
-0.2
phage
phage_bap4
+0.3
-0.1
+0.2
+0.2
+0.1
complex community
Community=guar; Passage=4
+0.1
+0.2
+0.0
-0.2
+0.5
phage
phage_bap4
+0.4
-0.2
+0.2
+0.3
+0.1
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