Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF74 and GFF75 overlap by 4 nucleotidesGFF75 and GFF76 are separated by 194 nucleotidesGFF76 and GFF77 are separated by 91 nucleotidesGFF77 and GFF78 are separated by 43 nucleotides GFF74 - Predicted secretion system X pseudopilin PulG-like, at 73,537 to 74,055 GFF74 GFF75 - Transcription regulator like protein EpsA, at 74,052 to 74,840 GFF75 GFF76 - hypothetical protein, at 75,035 to 75,880 GFF76 GFF77 - hypothetical protein, at 75,972 to 77,546 GFF77 GFF78 - Hemolysin activation/secretion protein associated with VreARI signalling system, at 77,590 to 79,200 GFF78
Group Condition GFF74 GFF75 GFF76 GFF77 GFF78
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. N.D. -1.0 -0.1 +0.0
carbon source Ying_sugar7 rep A; time point 3 N.D. N.D. -0.6 -0.3 -0.2
carbon source Ying_sugar7 rep C; time point 3 N.D. N.D. -0.7 -0.3 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. N.D. -0.6 -0.2 -0.1
carbon source Ying_sugar7 rep B; time point 3 N.D. N.D. -0.2 -0.2 -0.2
carbon source Ying_Others16 rep C; time point 3 N.D. N.D. -0.3 -0.1 +0.0
carbon source Ying_all64 rep A; time point 3 N.D. N.D. -0.2 -0.2 +0.0
carbon source Ying_AminoAcid20 rep B; time point 1 N.D. N.D. -0.2 -0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. N.D. +0.0 -0.2 +0.1
carbon source Ying_Others16 rep C; time point 2 N.D. N.D. +0.1 +0.1 -0.2
carbon source Ying_all64 rep B; time point 3 N.D. N.D. -0.1 -0.0 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. N.D. +0.3 +0.1 -0.1
carbon source Ying_all64 rep B; time point 1 N.D. N.D. -0.2 +0.2 +0.2
carbon source Ying_sugar7 rep C; time point 1 N.D. N.D. -0.0 -0.1 +0.5
carbon source Ying_Others16 rep A; time point 1 N.D. N.D. +0.3 +0.2 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. N.D. +0.1 -0.0 +0.4
carbon source Ying_Others16 rep B; time point 2 N.D. N.D. +0.4 +0.1 -0.0
carbon source Ying_sugar7 rep B; time point 2 N.D. N.D. +0.2 +0.2 +0.1
carbon source Ying_all64 rep C; time point 3 N.D. N.D. +0.2 -0.2 +0.6
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. N.D. +0.1 +0.1 +0.3
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. N.D. +0.6 +0.1 -0.1
carbon source Ying_all64 rep C; time point 1 N.D. N.D. +0.2 +0.2 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. N.D. +0.3 +0.3 +0.1
carbon source Ying_all64 rep C; time point 2 N.D. N.D. +0.4 -0.1 +0.3
carbon source Ying_Others16 rep C; time point 1 N.D. N.D. +0.1 +0.1 +0.4
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. N.D. +0.1 +0.2 +0.4
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. N.D. +0.2 +0.2 +0.3
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. N.D. +0.3 +0.3 +0.2
carbon source Ying_all64 rep A; time point 2 N.D. N.D. +0.4 +0.2 +0.3
carbon source Ying_Others16 rep A; time point 2 N.D. N.D. +0.4 +0.2 +0.3
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